Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   BACVE_RS06585 Genome accession   NZ_CP063687
Coordinates   1326856..1327254 (+) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain NST6     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1321856..1332254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACVE_RS06565 (BACVE_001330) - 1324284..1324646 (-) 363 WP_007409352.1 helix-turn-helix domain-containing protein -
  BACVE_RS06570 (BACVE_001331) hxlA 1324878..1325513 (+) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  BACVE_RS06575 (BACVE_001332) hxlB 1325510..1326067 (+) 558 WP_025650327.1 6-phospho-3-hexuloisomerase -
  BACVE_RS06580 (BACVE_001333) nucA/comI 1326398..1326835 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BACVE_RS06585 (BACVE_001334) nin/comJ 1326856..1327254 (+) 399 WP_007609299.1 competence protein ComJ Regulator
  BACVE_RS06590 (BACVE_001335) - 1327295..1328731 (-) 1437 WP_104843069.1 family 1 glycosylhydrolase -
  BACVE_RS06595 (BACVE_001336) - 1328835..1329158 (-) 324 WP_007409357.1 YckD family protein -
  BACVE_RS06600 (BACVE_001337) - 1329230..1329664 (-) 435 WP_014416871.1 RDD family protein -
  BACVE_RS06605 (BACVE_001338) - 1329679..1330815 (-) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  BACVE_RS06610 (BACVE_001339) - 1330880..1332082 (-) 1203 WP_014416870.1 GTP-binding protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=496269 BACVE_RS06585 WP_007609299.1 1326856..1327254(+) (nin/comJ) [Bacillus velezensis strain NST6]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=496269 BACVE_RS06585 WP_007609299.1 1326856..1327254(+) (nin/comJ) [Bacillus velezensis strain NST6]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758