Detailed information NTG0496160

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: INQ43_RS03135
• Genome accession: NZ_CP063658
• Coordinates: 697209..698666 (-)
• Length: 485 a.a.
• NCBI ID: WP_194037077.1
• Uniprot ID: A0A7S6ZXF0
• Organism: Lysobacter sp. H23M47
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 692209..703666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ43_RS03125 (INQ43_03125)	-	692641..695145 (+)	2505	WP_194037076.1	prolyl oligopeptidase family serine peptidase	-
INQ43_RS03130 (INQ43_03130)	-	695471..697027 (-)	1557	WP_194037544.1	SDR family oxidoreductase	-
INQ43_RS03135 (INQ43_03135)	pilR	697209..698666 (-)	1458	WP_194037077.1	sigma-54 dependent transcriptional regulator	Regulator
INQ43_RS03140 (INQ43_03140)	-	698688..700301 (-)	1614	WP_228062603.1	HAMP domain-containing sensor histidine kinase	-
INQ43_RS03145 (INQ43_03145)	sucC	700476..701639 (+)	1164	WP_194037079.1	ADP-forming succinate--CoA ligase subunit beta	-
INQ43_RS03150 (INQ43_03150)	sucD	701664..702539 (+)	876	WP_194035058.1	succinate--CoA ligase subunit alpha	-
INQ43_RS03155 (INQ43_03155)	-	702943..703641 (-)	699	WP_194035059.1	hypothetical protein	-

Sequence

Protein

• Length: 485 a.a.
• Molecular weight: 52496.03 Da
• Isoelectric Point: 6.1532

>NTDB_id=496160 INQ43_RS03135 WP_194037077.1 697209..698666(-) (pilR) [Lysobacter sp. H23M47]
MAETRSALIVDDERDIRELLVMTLGRMGLRCDTASSLGDARAHLARNRYDLCLTDMRLPDGSGIDLIAEISEQFPDTPVA
MITAFGNVDAAVEALKAGAFDFVAKPVELSVLRDLVRHALDLKEKPAVRANPENVATRLYGESPAMQQLRETITKVARSQ
APVYIAGESGVGKELVARTIHAEGSRGSGPFVPVNCGAIPNELMESEFFGHKKGSFTGAHADKPGLFHSADGGTLFLDEV
AELPLPMQVKLLRAIQEKSVKPVGANAEVMVDVRILSATHKDLAGMVAEGRFRQDLYYRINVIELRVPPLRERLSDLPGL
CAKIVQRLASDLGREPPALSAEAMDALGQYAFPGNVRELENILERAMAMADGDRLEVHDLHLPQASAAHATPRQAPREPG
VAPLQPPAPGSQTPQAAAAAAGIDPRTIDPRDTATSALPSYIEEIERAAIQHALQENRYNKTRTAASLGITFRALRYKLK
KLGID

Nucleotide

• Length: 1458 bp

>NTDB_id=496160 INQ43_RS03135 WP_194037077.1 697209..698666(-) (pilR) [Lysobacter sp. H23M47]
ATGGCTGAGACACGCAGCGCTTTGATAGTCGATGACGAGCGCGATATCCGCGAGTTGCTGGTAATGACCCTGGGCCGCAT
GGGACTGCGCTGCGATACCGCATCCAGCCTGGGCGATGCCCGCGCGCACCTGGCCCGCAACCGCTACGACCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCTCCGGCATTGACCTGATCGCCGAGATTTCCGAGCAGTTCCCCGACACGCCGGTCGCG
ATGATCACCGCCTTCGGCAATGTGGACGCCGCGGTGGAGGCGCTCAAGGCGGGCGCGTTCGATTTCGTCGCCAAGCCGGT
CGAACTGTCGGTGTTGCGCGACCTGGTCCGCCATGCGCTGGACCTCAAGGAGAAGCCGGCGGTACGGGCCAACCCGGAAA
ACGTGGCCACCCGCCTGTATGGCGAATCGCCCGCGATGCAGCAGCTGCGCGAGACCATCACCAAGGTCGCGCGCAGCCAG
GCCCCGGTGTACATCGCCGGCGAGTCGGGCGTGGGCAAGGAACTGGTTGCCCGCACGATCCACGCCGAGGGCAGCCGCGG
CAGCGGTCCCTTCGTGCCCGTCAACTGCGGCGCGATCCCCAACGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGG
GCAGCTTCACCGGCGCCCATGCCGACAAGCCCGGCCTGTTCCACAGCGCCGACGGCGGCACCCTGTTCCTGGACGAAGTC
GCCGAACTGCCGCTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGAAACCGGTGGGAGCCAACGC
CGAGGTGATGGTGGATGTACGCATCCTCTCGGCCACGCACAAGGATCTGGCCGGCATGGTTGCCGAGGGCCGCTTCCGCC
AAGACCTCTACTACCGGATCAATGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGTCTGTCCGACCTGCCGGGCCTG
TGCGCGAAGATCGTCCAGCGCCTGGCCTCCGACCTGGGCCGCGAACCGCCGGCGCTTTCCGCCGAGGCCATGGACGCCCT
TGGCCAGTACGCCTTTCCGGGCAACGTGCGCGAGCTGGAGAACATCCTCGAACGCGCCATGGCCATGGCCGACGGCGACC
GGCTCGAGGTGCATGACCTGCACTTGCCGCAGGCGAGCGCGGCCCATGCCACGCCGCGTCAGGCACCGCGCGAGCCCGGC
GTTGCGCCATTGCAGCCACCCGCGCCCGGCTCCCAGACGCCACAGGCGGCGGCCGCCGCGGCGGGGATCGACCCTCGCAC
CATCGATCCGCGCGACACCGCGACCAGCGCGTTGCCTTCGTACATCGAGGAAATCGAGCGCGCCGCAATCCAGCACGCGT
TGCAGGAAAACCGCTACAACAAGACCCGTACCGCCGCGTCGCTGGGCATCACTTTCCGCGCGCTGCGCTACAAGTTGAAG
AAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

• Bacterial regulatory protein, Fis family (HTH_8) (442-482)

• Response regulator receiver domain (Response_reg) (8-116)

3D structure

• AlphaFold DB: A0A7S6ZXF0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.212	99.175	0.577
pilR	Acinetobacter baumannii strain A118	46.721	100	0.47