Detailed information NTG0496139

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: INQ42_RS02870
• Genome accession: NZ_CP063657
• Coordinates: 636209..637666 (-)
• Length: 485 a.a.
• NCBI ID: WP_194035055.1
• Uniprot ID: -
• Organism: Novilysobacter avium strain H23M41
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 631209..642666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ42_RS02860 (INQ42_02860)	-	631643..634147 (+)	2505	WP_194035054.1	prolyl oligopeptidase family serine peptidase	-
INQ42_RS02865 (INQ42_02865)	-	634473..636029 (-)	1557	WP_194035718.1	SDR family NAD(P)-dependent oxidoreductase	-
INQ42_RS02870 (INQ42_02870)	pilR	636209..637666 (-)	1458	WP_194035055.1	sigma-54 dependent transcriptional regulator	Regulator
INQ42_RS02875 (INQ42_02875)	-	637688..639301 (-)	1614	WP_194035056.1	PAS domain-containing sensor histidine kinase	-
INQ42_RS02880 (INQ42_02880)	sucC	639476..640639 (+)	1164	WP_194035057.1	ADP-forming succinate--CoA ligase subunit beta	-
INQ42_RS02885 (INQ42_02885)	sucD	640664..641539 (+)	876	WP_194035058.1	succinate--CoA ligase subunit alpha	-
INQ42_RS02890 (INQ42_02890)	-	641943..642641 (-)	699	WP_194035059.1	hypothetical protein	-

Sequence

Protein

• Length: 485 a.a.
• Molecular weight: 52561.15 Da
• Isoelectric Point: 6.2036

>NTDB_id=496139 INQ42_RS02870 WP_194035055.1 636209..637666(-) (pilR) [Novilysobacter avium strain H23M41]
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASSLGDARAQLARNRYDLCLTDMRLPDGSGIDLIAEITEKFPETPVA
MITAFGNVDAAVEALKAGAFDFVAKPVELSVLRDLVRHALDLKEKPTVRSNPENLATRLYGESPAMQQLRETITKVARSQ
APVYIAGESGVGKELVARTIHAEGSRGSGPFVPVNCGAIPNELMESEFFGHKKGSFTGAHADKPGLFHSADGGTLFLDEV
AELPLPMQVKLLRAIQEKSVKPVGANAEVMVDVRILSATHKDLAGMVAEGRFRQDLYYRINVIELRVPPLRERLSDLPGL
CAKIVQRLASDLGREPPALSAEAMDALGQYAFPGNVRELENILERAMAMADGDRLEVHDLHLPQASAAHATPRQAPREPG
VAPLQPPAPGSQTPQAAAAAAGIDPRTIDPRDTATSALPSYIEEIERAAIQHALQENRYNKTRTAASLGITFRALRYKLK
KLGID

Nucleotide

• Length: 1458 bp

>NTDB_id=496139 INQ42_RS02870 WP_194035055.1 636209..637666(-) (pilR) [Novilysobacter avium strain H23M41]
ATGGCTGAGACACGCAGCGCTTTGGTAGTCGATGACGAGCGGGATATCCGCGAGTTGCTGGTGATGACCCTGGGCCGCAT
GGGACTGCGATGCGACACCGCGTCCAGCCTGGGCGATGCCCGCGCGCAGCTGGCGCGCAACCGCTATGACCTGTGCCTGA
CCGACATGCGCCTCCCGGACGGCTCGGGCATCGATCTGATCGCCGAGATCACCGAGAAGTTTCCGGAAACCCCGGTGGCG
ATGATCACCGCCTTCGGCAATGTCGATGCGGCGGTTGAGGCGCTCAAGGCCGGCGCCTTCGATTTTGTCGCCAAGCCGGT
CGAGCTGTCGGTGTTGCGCGACCTGGTCCGCCACGCGCTGGACCTGAAGGAGAAGCCGACGGTACGGTCCAATCCGGAAA
ACCTGGCCACCCGCCTGTACGGCGAATCGCCCGCGATGCAGCAGCTGCGCGAGACCATCACCAAGGTCGCGCGCAGCCAG
GCCCCGGTGTACATCGCCGGCGAGTCGGGCGTGGGCAAGGAACTGGTTGCCCGCACGATCCACGCCGAGGGCAGCCGCGG
CAGCGGTCCCTTCGTGCCCGTCAACTGCGGCGCGATCCCCAACGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGG
GCAGCTTCACCGGTGCCCACGCCGACAAGCCCGGGCTGTTCCACAGCGCCGACGGCGGCACCCTGTTCCTGGACGAGGTG
GCCGAACTGCCGCTGCCGATGCAGGTCAAGCTGCTGCGTGCGATCCAGGAAAAATCCGTCAAACCGGTCGGGGCCAACGC
GGAGGTGATGGTGGATGTGCGCATCCTTTCGGCCACGCACAAGGACCTGGCCGGCATGGTTGCCGAGGGCCGCTTCCGCC
AAGACCTCTACTACCGGATCAATGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGTCTGTCCGACCTGCCGGGCCTG
TGCGCGAAGATCGTCCAGCGCCTGGCCTCCGACCTGGGCCGCGAACCGCCGGCGCTTTCCGCCGAGGCCATGGACGCCCT
TGGCCAGTACGCCTTTCCGGGCAACGTGCGCGAGCTGGAGAACATCCTCGAACGCGCCATGGCCATGGCCGACGGCGACC
GGCTCGAGGTGCATGACCTGCACTTGCCGCAGGCGAGCGCGGCCCATGCCACGCCGCGTCAGGCACCGCGCGAGCCCGGC
GTTGCGCCATTGCAGCCACCCGCGCCCGGCTCCCAGACGCCACAGGCGGCGGCCGCCGCGGCGGGGATCGACCCTCGCAC
CATCGATCCGCGCGACACCGCGACCAGCGCGTTGCCTTCGTACATCGAGGAAATCGAGCGCGCCGCAATCCAGCACGCGT
TGCAGGAAAACCGCTACAACAAGACCCGTACCGCCGCGTCGCTGGGCATCACTTTTCGCGCGCTGCGCTACAAGTTGAAG
AAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

• Bacterial regulatory protein, Fis family (HTH_8) (442-482)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.796	99.175	0.573
pilR	Acinetobacter baumannii strain A118	46.721	100	0.47