Detailed information NTG0496076

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP362_RS07835
• Genome accession: NZ_CP063530
• Coordinates: 1507789..1508952 (-)
• Length: 387 a.a.
• NCBI ID: WP_101313248.1
• Uniprot ID: A0A2N3PHA8
• Organism: Helicobacter winghamensis strain DSM 111488
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1502789..1513952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP362_RS07810 (IP362_07775)	-	1503716..1504615 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP362_RS07815 (IP362_07780)	-	1504639..1505754 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
IP362_RS07820 (IP362_07785)	-	1505942..1506484 (-)	543	WP_006803062.1	YceI family protein	-
IP362_RS07825 (IP362_07790)	-	1506609..1507262 (+)	654	WP_101313247.1	thioredoxin domain-containing protein	-
IP362_RS07830 (IP362_07795)	-	1507346..1507747 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
IP362_RS07835 (IP362_07800)	kpsS	1507789..1508952 (-)	1164	WP_101313248.1	capsule biosynthesis protein	Regulator
IP362_RS07840 (IP362_07805)	-	1508918..1510993 (-)	2076	WP_006803058.1	capsular polysaccharide biosynthesis protein	-
IP362_RS07845 (IP362_07810)	-	1511140..1511331 (-)	192	WP_040498761.1	hypothetical protein	-
IP362_RS07850 (IP362_07815)	-	1511732..1512412 (-)	681	WP_006803057.1	nucleotidyltransferase family protein	-
IP362_RS07855 (IP362_07820)	-	1512400..1513005 (-)	606	WP_006803056.1	SIS domain-containing protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45886.22 Da
• Isoelectric Point: 10.0516

>NTDB_id=496076 IP362_RS07835 WP_101313248.1 1507789..1508952(-) (kpsS) [Helicobacter winghamensis strain DSM 111488]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDRDFYLKYSPKEFESKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIETLSLKFNVEGRVLYVHDLHLPTLLTNARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496076 IP362_RS07835 WP_101313248.1 1507789..1508952(-) (kpsS) [Helicobacter winghamensis strain DSM 111488]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGGATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAGAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGTGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGACTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAACAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

3D structure

• AlphaFold DB: A0A2N3PHA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.579	98.191	0.605