Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SALIVA_RS08200 Genome accession   NC_017595
Coordinates   1820215..1820946 (-) Length   243 a.a.
NCBI ID   WP_014634937.1    Uniprot ID   A0A2I1TM44
Organism   Streptococcus salivarius JIM8777     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1815215..1825946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS08175 (SALIVA_1669) - 1816283..1817464 (+) 1182 WP_014634936.1 NAD(P)/FAD-dependent oxidoreductase -
  SALIVA_RS08185 (SALIVA_1671) trmB 1817681..1818322 (-) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SALIVA_RS08190 (SALIVA_1672) ccrZ 1818332..1819123 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  SALIVA_RS08195 (SALIVA_1673) pptB 1819181..1820215 (-) 1035 WP_371748832.1 ABC transporter permease Regulator
  SALIVA_RS08200 (SALIVA_1674) pptA 1820215..1820946 (-) 732 WP_014634937.1 ABC transporter ATP-binding protein Regulator
  SALIVA_RS08205 (SALIVA_1675) - 1821011..1821430 (+) 420 WP_014634938.1 HIT family protein -
  SALIVA_RS08210 (SALIVA_1676) - 1821427..1821726 (+) 300 WP_014634939.1 hypothetical protein -
  SALIVA_RS10625 (SALIVA_1677) - 1821907..1822074 (-) 168 WP_014634940.1 hypothetical protein -
  SALIVA_RS08215 (SALIVA_1678) - 1822649..1823257 (-) 609 WP_002884297.1 DUF4230 domain-containing protein -
  SALIVA_RS10815 (SALIVA_1680) - 1823275..1823400 (-) 126 WP_002884447.1 hypothetical protein -
  SALIVA_RS08220 (SALIVA_1681) - 1823836..1825941 (-) 2106 WP_014634941.1 AAA family ATPase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26845.15 Da        Isoelectric Point: 4.6019

>NTDB_id=49485 SALIVA_RS08200 WP_014634937.1 1820215..1820946(-) (pptA) [Streptococcus salivarius JIM8777]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLKTVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=49485 SALIVA_RS08200 WP_014634937.1 1820215..1820946(-) (pptA) [Streptococcus salivarius JIM8777]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
CGAATTAGTTGGTCTTATCGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACCATTCAGCAAGATTCAGCTAGCTATCGTCAGAAGATTGGTTACATCCCT
GAAACGCCAAGCCTCTATGAAGAATTGACGCTTCGTGAACATTTGAAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAAGGAATGGCACGTGCGGACAAGTACCTTAAGCTCTTTCGTTTAGATGAAAAGCTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAACCCAAGTCTTTTCATTGTTGATGAACCTTTC
TTGGGCTTGGACCCCTTGGCAATCTCCGACTTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCGGCTGAGAAGATGTGTGACCGCTTCGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GAACTCTTGAGGAGCTCCGTCAGACTTTTGGCGATGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1TM44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

96.708

100

0.967

Multiple sequence alignment