Detailed information NTG0494792

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: IPU21_RS00210
• Genome accession: NZ_CP063368
• Coordinates: 46357..47706 (-)
• Length: 449 a.a.
• NCBI ID: WP_212574914.1
• Uniprot ID: A0AAQ0D6N3
• Organism: Staphylococcus delphini strain 245-1
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 41357..52706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IPU21_RS00195 (IPU21_00195)	-	41365..41703 (-)	339	WP_107376271.1	SAUGI family uracil-DNA glycosylase inhibitor	-
IPU21_RS00200 (IPU21_00200)	-	42364..44655 (+)	2292	WP_212574912.1	CDP-glycerol glycerophosphotransferase family protein	-
IPU21_RS00205 (IPU21_00205)	ccrB	44709..46337 (-)	1629	WP_212574913.1	cassette chromosome recombinase CcrB	Machinery gene
IPU21_RS00210 (IPU21_00210)	ccrA	46357..47706 (-)	1350	WP_212574914.1	cassette chromosome recombinase CcrA	Machinery gene
IPU21_RS00215 (IPU21_00215)	-	47883..48140 (-)	258	WP_070817192.1	hypothetical protein	-
IPU21_RS00220 (IPU21_00220)	cch1	48208..49998 (-)	1791	WP_212574915.1	cassette chromosome replicative helicase	-
IPU21_RS00225 (IPU21_00225)	-	50124..51494 (-)	1371	WP_244810691.1	DUF6038 family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52356.11 Da
• Isoelectric Point: 10.0447

>NTDB_id=494792 IPU21_RS00210 WP_212574914.1 46357..47706(-) (ccrA) [Staphylococcus delphini strain 245-1]
MKQAIGYLRQSTIKQQSLSAQKQKIKSLAEKHNIQNITFYSDKQSGRTDKRNGYQQIITLIQQGHCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMNKSFDRLKLNIFISLAELESDNISEQVKNGLREKARQGKLITTHAPFGYHYH
DGTFTINKDEAPTVKAIFDDYVEGYGYKKISQRLEKSNHLINRKPFQVRCIILNPNYCGRVLNQYGQYDNMFPPIVSVSL
YEYAQKVRNQRQVNRRSSDNQLKQKIKCPCCGSTLTNLTIRKKKHALRYYVCPRNMNASRFVCDFKGINAQMLETRVLTT
CKDFFQNQQLYSKINQTIQQQLKNQRALETKHTLTQEQLIEKLAQGTITADTFREKSLLLQQQSKTNSSISSTQIQRAFQ
NVIQQCFTLNMLYPYIDEIHITENKTLTGIYFKNEPLNIVNQDMQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=494792 IPU21_RS00210 WP_212574914.1 46357..47706(-) (ccrA) [Staphylococcus delphini strain 245-1]
ATGAAACAAGCCATTGGTTACTTACGTCAAAGCACAATAAAACAACAATCACTCTCAGCCCAAAAACAAAAAATCAAGTC
ATTAGCTGAAAAACACAATATCCAAAACATCACGTTTTATAGTGATAAACAATCAGGTCGAACTGATAAACGCAATGGTT
ACCAACAAATCATTACGCTAATTCAACAAGGTCACTGTGACGTATTATGTTGCTACAGACTGAATCGACTTCATCGTAAT
CTAAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATGTTCATATCTTAAGCGTTCATGATGGCTACTTCGA
CATGAATAAATCATTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTAGAATCTGATAATATCAGTGAAC
AGGTCAAAAATGGACTACGCGAAAAAGCACGCCAAGGTAAACTCATTACAACTCACGCCCCTTTTGGCTATCACTATCAC
GATGGGACATTTACTATAAATAAGGATGAAGCACCTACTGTAAAAGCCATATTCGACGACTACGTGGAAGGTTACGGATA
CAAGAAAATTTCTCAACGCTTAGAAAAATCCAATCACCTCATCAACCGAAAACCTTTCCAAGTGCGTTGTATTATCCTAA
ATCCTAATTACTGTGGCCGAGTGCTAAATCAATATGGCCAATACGATAATATGTTCCCCCCTATTGTTTCAGTCAGCTTG
TATGAATACGCTCAAAAAGTCAGAAACCAAAGACAAGTTAATCGTAGATCTTCAGACAACCAACTCAAACAAAAAATCAA
ATGCCCTTGTTGTGGTTCAACGCTCACCAATCTGACCATTAGGAAAAAGAAGCACGCATTGCGTTATTATGTTTGTCCAA
GAAATATGAATGCTTCACGTTTTGTCTGTGATTTCAAGGGCATCAATGCACAAATGCTAGAAACAAGGGTCTTAACAACT
TGTAAGGACTTTTTTCAAAATCAACAGCTCTATTCAAAAATTAATCAAACAATCCAACAACAACTAAAAAACCAAAGAGC
TTTGGAAACGAAACATACACTCACCCAAGAACAACTAATAGAAAAGCTCGCTCAAGGGACGATTACTGCAGATACATTCA
GAGAAAAATCTCTACTGTTACAACAACAATCAAAAACCAATTCATCCATTAGCTCGACTCAAATTCAAAGGGCTTTTCAA
AATGTCATTCAACAATGTTTCACGTTAAACATGTTATACCCCTATATTGATGAAATTCATATTACAGAAAACAAAACGCT
TACAGGAATCTATTTCAAAAATGAACCCTTAAACATCGTCAATCAAGATATGCAATCATCGATTGCTTAA

Domains

Predicted by InterproScan.

• Recombinase (Recombinase) (169-250)

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	78.174	100	0.782
ccrA	Staphylococcus aureus N315	72.16	100	0.722