Detailed information NTG0494718

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: INQ56_RS16590
• Genome accession: NZ_CP063360
• Coordinates: 3210301..3211476 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain BIM B-263
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3205301..3216476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ56_RS16560 (INQ56_16560)	-	3205477..3205896 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
INQ56_RS16565 (INQ56_16565)	-	3205953..3206675 (-)	723	WP_373870389.1	ComF family protein	-
INQ56_RS16570 (INQ56_16570)	-	3206636..3206929 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
INQ56_RS16575 (INQ56_16575)	comFA	3206994..3208373 (-)	1380	WP_155720713.1	DEAD/DEAH box helicase	Machinery gene
INQ56_RS16580 (INQ56_16580)	-	3208493..3209335 (-)	843	WP_024719242.1	DegV family protein	-
INQ56_RS16585 (INQ56_16585)	degU	3209547..3210236 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
INQ56_RS16590 (INQ56_16590)	degS	3210301..3211476 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
INQ56_RS16595 (INQ56_16595)	-	3211698..3212366 (+)	669	WP_017357860.1	YigZ family protein	-
INQ56_RS16600 (INQ56_16600)	-	3212351..3213448 (+)	1098	WP_007499958.1	LCP family protein	-
INQ56_RS16605 (INQ56_16605)	-	3213487..3214554 (-)	1068	WP_024719245.1	glycosyltransferase family 4 protein	-
INQ56_RS16610 (INQ56_16610)	tuaH	3214689..3215885 (-)	1197	WP_039169832.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=494718 INQ56_RS16590 WP_024719243.1 3210301..3211476(-) (degS) [Bacillus altitudinis strain BIM B-263]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=494718 INQ56_RS16590 WP_024719243.1 3210301..3211476(-) (degS) [Bacillus altitudinis strain BIM B-263]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTTCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTGCTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841