Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IM687_RS19740 Genome accession   NZ_CP063358
Coordinates   4195827..4196234 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain ZDHY95     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4190827..4201234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM687_RS19720 (IM687_19720) - 4191785..4192651 (-) 867 WP_043942369.1 CheR family methyltransferase -
  IM687_RS19725 (IM687_19725) - 4192712..4194760 (-) 2049 WP_020305670.1 methyl-accepting chemotaxis protein -
  IM687_RS19730 (IM687_19730) - 4194839..4195375 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  IM687_RS19735 (IM687_19735) pilH 4195417..4195782 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  IM687_RS19740 (IM687_19740) pilG 4195827..4196234 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  IM687_RS19745 (IM687_19745) gshB 4196471..4197421 (+) 951 WP_014597995.1 glutathione synthase -
  IM687_RS19750 (IM687_19750) - 4197509..4198402 (+) 894 WP_019405529.1 energy transducer TonB -
  IM687_RS19755 (IM687_19755) - 4198468..4199037 (+) 570 WP_053528280.1 YqgE/AlgH family protein -
  IM687_RS19760 (IM687_19760) ruvX 4199034..4199462 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  IM687_RS19765 (IM687_19765) pyrR 4199480..4199995 (+) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IM687_RS19770 (IM687_19770) - 4200049..4201065 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=494656 IM687_RS19740 WP_003282729.1 4195827..4196234(-) (pilG) [Stutzerimonas stutzeri strain ZDHY95]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=494656 IM687_RS19740 WP_003282729.1 4195827..4196234(-) (pilG) [Stutzerimonas stutzeri strain ZDHY95]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4