Detailed information NTG0494650

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: IM687_RS12725
• Genome accession: NZ_CP063358
• Coordinates: 2696231..2698456 (-)
• Length: 741 a.a.
• NCBI ID: WP_196111233.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain ZDHY95
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2691231..2703456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM687_RS12690 (IM687_12690)	murB	2691621..2692640 (-)	1020	WP_196111231.1	UDP-N-acetylmuramate dehydrogenase	-
IM687_RS12695 (IM687_12695)	-	2692637..2693104 (-)	468	WP_196111232.1	low molecular weight protein-tyrosine-phosphatase	-
IM687_RS12700 (IM687_12700)	kdsB	2693106..2693870 (-)	765	WP_049339268.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IM687_RS12705 (IM687_12705)	-	2693867..2694052 (-)	186	WP_011913743.1	Trm112 family protein	-
IM687_RS12710 (IM687_12710)	lpxK	2694098..2695102 (-)	1005	WP_111481991.1	tetraacyldisaccharide 4'-kinase	-
IM687_RS12715 (IM687_12715)	-	2695102..2695530 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
IM687_RS12720 (IM687_12720)	-	2695527..2696159 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
IM687_RS12725 (IM687_12725)	comA	2696231..2698456 (-)	2226	WP_196111233.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IM687_RS12730 (IM687_12730)	-	2698601..2699116 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
IM687_RS12735 (IM687_12735)	-	2699129..2700373 (-)	1245	WP_196112422.1	lipoprotein-releasing ABC transporter permease subunit	-
IM687_RS12740 (IM687_12740)	lolD	2700373..2701071 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
IM687_RS12745 (IM687_12745)	-	2701079..2702326 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
IM687_RS12750 (IM687_12750)	-	2702359..2702994 (+)	636	WP_011913752.1	PilZ domain-containing protein	-
IM687_RS12755 (IM687_12755)	-	2702998..2703306 (+)	309	WP_181122495.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81003.53 Da
• Isoelectric Point: 9.6447

>NTDB_id=494650 IM687_RS12725 WP_196111233.1 2696231..2698456(-) (comA) [Stutzerimonas stutzeri strain ZDHY95]
MRTWMLALAAGLVLPCFLPALPAQWFCAALATVGLPLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLF
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEMPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AEQAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLETLDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=494650 IM687_RS12725 WP_196111233.1 2696231..2698456(-) (comA) [Stutzerimonas stutzeri strain ZDHY95]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCATGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGACTGTCGGACTGCCGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTACTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCGGCGTCCATGGACGGTCGTACGTTCTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGACGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGTTC
GATCCCCTGGTCACTTTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCGCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGACTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGATGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGACGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTACTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGACCCTTGACATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.227	96.356	0.648
comA	Ralstonia pseudosolanacearum GMI1000	37.29	100	0.39