Detailed information NTG0493969

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: IM816_RS02815
• Genome accession: NZ_CP063231
• Coordinates: 664505..665908 (-)
• Length: 467 a.a.
• NCBI ID: WP_250339711.1
• Uniprot ID: -
• Organism: Luteibacter flocculans strain EIF3
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 659505..670908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM816_RS02805 (IM816_02800)	-	660334..661536 (+)	1203	WP_250339709.1	hypothetical protein	-
IM816_RS02810 (IM816_02805)	-	661554..664451 (+)	2898	WP_250339710.1	membrane-targeted effector domain-containing toxin	-
IM816_RS02815 (IM816_02810)	pilR	664505..665908 (-)	1404	WP_250339711.1	sigma-54 dependent transcriptional regulator	Regulator
IM816_RS02820 (IM816_02815)	-	665975..667753 (-)	1779	WP_250339712.1	HAMP domain-containing sensor histidine kinase	-
IM816_RS02825 (IM816_02820)	sucC	667881..669041 (+)	1161	WP_072322600.1	ADP-forming succinate--CoA ligase subunit beta	-
IM816_RS02830 (IM816_02825)	sucD	669056..669928 (+)	873	WP_072322601.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 467 a.a.
• Molecular weight: 50825.51 Da
• Isoelectric Point: 6.0504

>NTDB_id=493969 IM816_RS02815 WP_250339711.1 664505..665908(-) (pilR) [Luteibacter flocculans strain EIF3]
MSKQTVLVIDDERDIRELLTITLGRMELDVDAVGSVSEARSALAARRYDLCFTDMRLPDGSGQEIIELIAASFPDMPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIHLLRRLVRTALRLSEERKAEAGNKGTPGGDRLIGESPAMNEVRAKIAKLARN
QAPVYIAGESGVGKELVARLIHEMGPRSAGAFVPVNCGAIPSELMESEFFGHRKGSFTGAHVDKEGLFQAAQGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDVRILSATHKNLASLVEQGLFRQDLFYRINVIELRVPPLRERRGDVPR
LADFILRQLATESGGAPGRLRPEALAALEAYPFPGNVRELENILERAMAMCEGETIEADDLMLPQRMPSAAPSLATAVEA
TLVAAATQPARSAPAADGSLEDYISNIERDTIIKALEESRYNKTATAKKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1404 bp

>NTDB_id=493969 IM816_RS02815 WP_250339711.1 664505..665908(-) (pilR) [Luteibacter flocculans strain EIF3]
ATGAGCAAGCAGACCGTACTGGTCATCGACGACGAACGGGACATCCGCGAGTTGCTGACCATCACACTCGGTCGAATGGA
ACTCGACGTCGACGCCGTGGGGAGCGTCAGCGAAGCGCGGAGCGCATTGGCCGCACGGCGCTATGACCTATGCTTCACGG
ACATGCGGCTGCCCGACGGCAGCGGCCAGGAAATCATCGAACTCATCGCGGCCAGCTTCCCGGACATGCCGGTGGCGATG
ATCACCGCCTATGGCAACGTGGATGCGGCCGTGAACGCATTGAAGGCGGGTGCCTTCGATTTCGTCTCCAAGCCGGTGGA
CATCCATCTGCTTCGCCGCCTCGTTCGCACCGCCCTGCGCCTTTCCGAGGAACGCAAGGCGGAGGCCGGCAACAAGGGCA
CGCCGGGGGGTGACCGGCTCATCGGTGAGTCGCCGGCCATGAACGAGGTGCGCGCCAAGATCGCCAAGCTGGCGCGCAAC
CAGGCGCCGGTCTACATCGCGGGCGAATCGGGTGTAGGCAAGGAGCTTGTCGCGCGCCTCATCCACGAAATGGGCCCGCG
CTCCGCGGGCGCCTTCGTGCCCGTGAACTGCGGTGCCATTCCGTCGGAACTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGCTTCACCGGCGCACATGTCGACAAGGAAGGCCTGTTCCAGGCCGCCCAGGGCGGCACCTTGTTTCTCGACGAA
GTGGCCGAACTGCCCCTGCATATGCAGGTGAAGCTGCTGCGCGCGATTCAGGAGAAGGCGGTTCGTCCGATCGGCGGGCG
CGATGAGATTCCGGTGGACGTGCGCATTCTCTCGGCCACGCACAAGAATCTGGCTTCGCTGGTCGAGCAAGGTCTGTTTC
GCCAGGATCTGTTCTATCGCATCAACGTGATCGAGTTGCGCGTGCCGCCGCTGCGCGAGCGCCGGGGCGACGTGCCACGC
CTGGCGGACTTCATCCTGCGCCAGCTCGCTACGGAATCCGGCGGTGCGCCGGGGCGCCTGCGTCCGGAAGCGCTGGCCGC
GCTGGAGGCCTACCCCTTCCCCGGCAATGTGCGCGAACTGGAGAACATCCTCGAACGCGCCATGGCCATGTGCGAGGGCG
AGACCATCGAGGCAGACGACCTCATGCTGCCTCAGCGCATGCCGTCGGCTGCACCTTCGCTCGCGACCGCCGTGGAGGCC
ACGCTGGTCGCTGCGGCCACGCAACCGGCGCGCAGCGCACCCGCCGCCGATGGCTCACTCGAGGATTACATCTCCAATAT
CGAGCGCGACACGATCATCAAGGCGCTGGAAGAGTCGCGCTACAACAAGACGGCGACGGCGAAGAAGCTGGGAATCACCT
TCCGCGCATTGCGCTACAAGTTGAAGAAACTCGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-464)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.028	100	0.61
pilR	Acinetobacter baumannii strain A118	47.948	99.143	0.475