Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SSAL_RS01995 Genome accession   NC_017594
Coordinates   387411..388142 (+) Length   243 a.a.
NCBI ID   WP_014632700.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 382411..393142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS01970 (Ssal_00425) - 382414..384519 (+) 2106 WP_013991074.1 ATP-dependent Clp protease ATP-binding subunit -
  SSAL_RS10315 (Ssal_00426) - 384955..385080 (+) 126 WP_002884447.1 hypothetical protein -
  SSAL_RS01975 (Ssal_00427) - 385098..385706 (+) 609 WP_013991073.1 DUF4230 domain-containing protein -
  SSAL_RS10180 (Ssal_00428) - 386283..386450 (+) 168 WP_014632697.1 hypothetical protein -
  SSAL_RS01985 (Ssal_00429) - 386631..386930 (-) 300 WP_014632698.1 hypothetical protein -
  SSAL_RS01990 (Ssal_00430) - 386927..387346 (-) 420 WP_014632699.1 HIT family protein -
  SSAL_RS01995 (Ssal_00431) pptA 387411..388142 (+) 732 WP_014632700.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS02000 (Ssal_00432) pptB 388139..389176 (+) 1038 WP_045001493.1 ABC transporter permease Regulator
  SSAL_RS02005 (Ssal_00433) - 389234..390025 (+) 792 WP_002884270.1 cell cycle regulator CcrZ -
  SSAL_RS02010 (Ssal_00434) trmB 390035..390676 (+) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SSAL_RS02020 (Ssal_00435) - 390893..392074 (-) 1182 WP_014632702.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26869.13 Da        Isoelectric Point: 4.4799

>NTDB_id=49387 SSAL_RS01995 WP_014632700.1 387411..388142(+) (pptA) [Streptococcus salivarius 57.I]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGNLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=49387 SSAL_RS01995 WP_014632700.1 387411..388142(+) (pptA) [Streptococcus salivarius 57.I]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACCTTTGAGGTGGCTGATGG
TGAATTAGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCCAGCTATCGTCAGAAGATAGGTTATATTCCC
GAAACACCAAGTCTCTATGAAGAATTGACGCTTCGTGAACATTTGGAAACTGTGCTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATAGTTGATGAACCCTTC
TTGGGCTTGGACCCCTTGGCAATCTCCGACTTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCAGCTGAGAAGATGTGCGACCGCTTCGTGATTTTGCATCATGGACAGGTCTTGGCACAGG
GAAATCTTGAGGAGCTCCGTCAGACTTTTGGCGATGATAGTGCTAGTCTTAACGATATCTACATGCAGCTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971

Multiple sequence alignment