Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SSAL_RS00015 Genome accession   NC_017594
Coordinates   2017..2784 (-) Length   255 a.a.
NCBI ID   WP_013991348.1    Uniprot ID   A0AB33ZDS6
Organism   Streptococcus salivarius 57.I     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1..7784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS00010 (Ssal_00001) dnaA 414..1778 (-) 1365 WP_014632472.1 chromosomal replication initiator protein DnaA -
  SSAL_RS00015 (Ssal_00002) spo0J 2017..2784 (-) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  SSAL_RS00020 (Ssal_00003) htrA 2850..4085 (-) 1236 WP_013991347.1 trypsin-like peptidase domain-containing protein Regulator
  SSAL_RS00025 (Ssal_00004) rlmH 4291..4770 (+) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SSAL_RS00030 (Ssal_00005) - 4786..5469 (+) 684 WP_013991345.1 YoaK family protein -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29363.86 Da        Isoelectric Point: 9.5843

>NTDB_id=49369 SSAL_RS00015 WP_013991348.1 2017..2784(-) (spo0J) [Streptococcus salivarius 57.I]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=49369 SSAL_RS00015 WP_013991348.1 2017..2784(-) (spo0J) [Streptococcus salivarius 57.I]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCCT
ATATCAGTAACGCTCTTAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAACTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576


Multiple sequence alignment