Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IMZ18_RS12295 Genome accession   NZ_CP063151
Coordinates   2268560..2268751 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2263560..2273751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS12270 (IMZ18_12270) appD 2263897..2264883 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  IMZ18_RS12275 (IMZ18_12275) yjaZ 2265075..2265860 (-) 786 WP_014479439.1 DUF2268 domain-containing protein -
  IMZ18_RS12280 (IMZ18_12280) fabF 2265936..2267177 (-) 1242 WP_014479438.1 beta-ketoacyl-ACP synthase II -
  IMZ18_RS12285 (IMZ18_12285) fabH 2267200..2268138 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  IMZ18_RS12290 (IMZ18_12290) yjzB 2268303..2268530 (+) 228 WP_031600361.1 spore coat protein YjzB -
  IMZ18_RS12295 (IMZ18_12295) comZ 2268560..2268751 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  IMZ18_RS12300 (IMZ18_12300) med 2268766..2269719 (-) 954 WP_014479436.1 transcriptional regulator Med Regulator
  IMZ18_RS12305 (IMZ18_12305) - 2269810..2270367 (-) 558 WP_014479435.1 hypothetical protein -
  IMZ18_RS12310 (IMZ18_12310) - 2270449..2271183 (-) 735 WP_014479433.1 hypothetical protein -
  IMZ18_RS12315 (IMZ18_12315) yjzD 2271432..2271617 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  IMZ18_RS12320 (IMZ18_12320) yjzC 2271663..2271842 (-) 180 WP_003245356.1 YjzC family protein -
  IMZ18_RS12325 (IMZ18_12325) - 2272020..2273170 (+) 1151 WP_087614160.1 IS3 family transposase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=493481 IMZ18_RS12295 WP_003224559.1 2268560..2268751(-) (comZ) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=493481 IMZ18_RS12295 WP_003224559.1 2268560..2268751(-) (comZ) [Bacillus subtilis subsp. subtilis strain CMIN-4]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1