Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   A0083_RS04915 Genome accession   NZ_CP063089
Coordinates   981768..982421 (+) Length   217 a.a.
NCBI ID   WP_039664137.1    Uniprot ID   A0A0A8HA37
Organism   Campylobacter sp. 2014D-0216     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 976768..987421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0083_RS04890 (A0083_04890) - 976865..978385 (-) 1521 WP_197552542.1 inorganic phosphate transporter -
  A0083_RS04895 (A0083_04895) pdxA 978431..979531 (-) 1101 WP_120759202.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  A0083_RS04900 (A0083_04900) - 979528..980295 (-) 768 WP_039664134.1 pyridoxine 5'-phosphate synthase -
  A0083_RS04905 (A0083_04905) - 980352..981317 (+) 966 WP_120759206.1 Ppx/GppA family phosphatase -
  A0083_RS04910 (A0083_04910) - 981328..981771 (+) 444 WP_197552544.1 GatB/YqeY domain-containing protein -
  A0083_RS04915 (A0083_04915) CJE0566 981768..982421 (+) 654 WP_039664137.1 DNA/RNA endonuclease G Regulator
  A0083_RS04920 (A0083_04920) dnaK 982456..984318 (-) 1863 WP_120759210.1 molecular chaperone DnaK -
  A0083_RS04925 (A0083_04925) - 984350..984571 (-) 222 WP_039641671.1 hypothetical protein -
  A0083_RS04930 (A0083_04930) grpE 984590..985072 (-) 483 WP_232087584.1 nucleotide exchange factor GrpE -
  A0083_RS04935 (A0083_04935) - 985096..985878 (-) 783 WP_197552547.1 HrcA family transcriptional regulator -
  A0083_RS08215 - 986114..986245 (+) 132 WP_256378632.1 hypothetical protein -
  A0083_RS04940 (A0083_04940) - 986234..986863 (-) 630 WP_197552549.1 hypothetical protein -
  A0083_RS04945 (A0083_04945) - 986860..987093 (-) 234 WP_120759218.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25957.87 Da        Isoelectric Point: 9.6671

>NTDB_id=492840 A0083_RS04915 WP_039664137.1 981768..982421(+) (CJE0566) [Campylobacter sp. 2014D-0216]
MKKVLTLCALALSSFAYTQYELHPSFKPYFKECSLLMDKYYYINCYDYNYKGTKAIAYKLEAKILNQGHIKKRPRFEDDT
NIPKKYRTYWEDYLRSGYTRGHVVPNQSMNATPQAQLSTFLMSNITPQKKDINAEIWNEIEQRERYLAKKNKELEVLNLV
LYDDKPKRIKNNIAIPSFYVKILKAKNFSECYKVPNNDNFARFDRNYFKEDCKKYID

Nucleotide


Download         Length: 654 bp        

>NTDB_id=492840 A0083_RS04915 WP_039664137.1 981768..982421(+) (CJE0566) [Campylobacter sp. 2014D-0216]
ATGAAAAAAGTTTTAACGCTTTGTGCTTTAGCTTTAAGCTCTTTTGCTTATACTCAATATGAATTACACCCTAGTTTTAA
GCCGTATTTTAAAGAATGCTCTTTATTGATGGATAAGTATTATTACATCAACTGTTATGATTATAATTATAAGGGTACCA
AGGCCATTGCTTATAAACTAGAAGCTAAAATTTTAAATCAAGGGCACATCAAAAAACGCCCACGCTTTGAAGATGATACC
AATATCCCTAAAAAATACAGAACTTACTGGGAGGATTACCTAAGAAGCGGCTATACAAGAGGACATGTCGTGCCTAATCA
ATCTATGAATGCAACTCCACAAGCCCAACTTAGCACTTTTTTAATGAGTAATATCACACCACAAAAAAAAGATATCAATG
CTGAAATTTGGAATGAAATCGAACAAAGAGAGCGGTATTTAGCAAAGAAAAATAAAGAATTAGAAGTCTTAAATTTAGTG
CTTTATGATGACAAACCAAAACGCATTAAAAACAATATAGCTATTCCTAGTTTTTATGTCAAAATTCTTAAGGCTAAAAA
TTTTAGTGAATGTTATAAAGTGCCAAATAACGATAATTTTGCAAGATTTGACAGAAATTATTTCAAAGAAGACTGTAAGA
AATATATTGATTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(37-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8HA37

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

60.369

100

0.604
  CJE1441 Campylobacter jejuni RM1221

63.682

92.627

0.59