Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   IL989_RS05480 Genome accession   NZ_CP062984
Coordinates   1085496..1086449 (+) Length   317 a.a.
NCBI ID   WP_013351813.1    Uniprot ID   A0AAP7TCS7
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1080496..1091449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS05455 (IL989_05455) argF 1082304..1083260 (+) 957 WP_193351571.1 ornithine carbamoyltransferase -
  IL989_RS05460 (IL989_05460) - 1083352..1083531 (+) 180 WP_013351809.1 YjzC family protein -
  IL989_RS05465 (IL989_05465) - 1083572..1083760 (-) 189 WP_013351810.1 YjzD family protein -
  IL989_RS05470 (IL989_05470) - 1084021..1084755 (+) 735 WP_193351572.1 hypothetical protein -
  IL989_RS05475 (IL989_05475) - 1084836..1085402 (+) 567 WP_193351573.1 hypothetical protein -
  IL989_RS05480 (IL989_05480) med 1085496..1086449 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  IL989_RS05485 (IL989_05485) comZ 1086462..1086653 (+) 192 WP_013351814.1 ComZ family protein Regulator
  IL989_RS05490 (IL989_05490) - 1086684..1086902 (-) 219 WP_013351815.1 hypothetical protein -
  IL989_RS05495 (IL989_05495) - 1087068..1088006 (+) 939 WP_013351816.1 beta-ketoacyl-ACP synthase III -
  IL989_RS05500 (IL989_05500) fabF 1088030..1089268 (+) 1239 WP_065981162.1 beta-ketoacyl-ACP synthase II -
  IL989_RS05505 (IL989_05505) - 1089352..1090137 (+) 786 WP_193351574.1 DUF2268 domain-containing protein -
  IL989_RS05510 (IL989_05510) - 1090311..1091297 (+) 987 WP_014470616.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.94 Da        Isoelectric Point: 4.5494

>NTDB_id=492233 IL989_RS05480 WP_013351813.1 1085496..1086449(+) (med) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=492233 IL989_RS05480 WP_013351813.1 1085496..1086449(+) (med) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTCATCAAAGGGGCGAAATATGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGACAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACTGTGCAAAATGTAGACAAAGCCTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785