Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IL989_RS05485 Genome accession   NZ_CP062984
Coordinates   1086462..1086653 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081462..1091653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS05455 (IL989_05455) argF 1082304..1083260 (+) 957 WP_193351571.1 ornithine carbamoyltransferase -
  IL989_RS05460 (IL989_05460) - 1083352..1083531 (+) 180 WP_013351809.1 YjzC family protein -
  IL989_RS05465 (IL989_05465) - 1083572..1083760 (-) 189 WP_013351810.1 YjzD family protein -
  IL989_RS05470 (IL989_05470) - 1084021..1084755 (+) 735 WP_193351572.1 hypothetical protein -
  IL989_RS05475 (IL989_05475) - 1084836..1085402 (+) 567 WP_193351573.1 hypothetical protein -
  IL989_RS05480 (IL989_05480) med 1085496..1086449 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  IL989_RS05485 (IL989_05485) comZ 1086462..1086653 (+) 192 WP_013351814.1 ComZ family protein Regulator
  IL989_RS05490 (IL989_05490) - 1086684..1086902 (-) 219 WP_013351815.1 hypothetical protein -
  IL989_RS05495 (IL989_05495) - 1087068..1088006 (+) 939 WP_013351816.1 beta-ketoacyl-ACP synthase III -
  IL989_RS05500 (IL989_05500) fabF 1088030..1089268 (+) 1239 WP_065981162.1 beta-ketoacyl-ACP synthase II -
  IL989_RS05505 (IL989_05505) - 1089352..1090137 (+) 786 WP_193351574.1 DUF2268 domain-containing protein -
  IL989_RS05510 (IL989_05510) - 1090311..1091297 (+) 987 WP_014470616.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=492234 IL989_RS05485 WP_013351814.1 1086462..1086653(+) (comZ) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=492234 IL989_RS05485 WP_013351814.1 1086462..1086653(+) (comZ) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCGAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81