Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IIE26_RS02270 Genome accession   NZ_CP062790
Coordinates   439286..439480 (+) Length   64 a.a.
NCBI ID   WP_009331228.1    Uniprot ID   A0A169G1N2
Organism   Cytobacillus oceanisediminis strain YPW-V2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 434286..444480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IIE26_RS02250 (IIE26_02250) - 436123..436314 (-) 192 WP_009331232.1 DUF2929 family protein -
  IIE26_RS02255 (IIE26_02255) - 436529..437266 (+) 738 WP_009331231.1 serine aminopeptidase domain-containing protein -
  IIE26_RS02260 (IIE26_02260) - 437348..438181 (+) 834 WP_071157531.1 hypothetical protein -
  IIE26_RS02265 (IIE26_02265) med 438300..439259 (+) 960 WP_071157530.1 BMP family ABC transporter substrate-binding protein Regulator
  IIE26_RS02270 (IIE26_02270) comZ 439286..439480 (+) 195 WP_009331228.1 ComZ family protein Regulator
  IIE26_RS02275 (IIE26_02275) - 440453..441415 (+) 963 WP_009331227.1 nuclease-related domain-containing protein -
  IIE26_RS02280 (IIE26_02280) - 441426..441809 (-) 384 WP_009331226.1 hypothetical protein -
  IIE26_RS02285 (IIE26_02285) - 442025..442957 (+) 933 WP_009331225.1 beta-ketoacyl-ACP synthase III -
  IIE26_RS02290 (IIE26_02290) fabF 443006..444244 (+) 1239 WP_009331224.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7481.71 Da        Isoelectric Point: 4.1018

>NTDB_id=491381 IIE26_RS02270 WP_009331228.1 439286..439480(+) (comZ) [Cytobacillus oceanisediminis strain YPW-V2]
MQLNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFTKVMNEAYEMGKADALKESE

Nucleotide


Download         Length: 195 bp        

>NTDB_id=491381 IIE26_RS02270 WP_009331228.1 439286..439480(+) (comZ) [Cytobacillus oceanisediminis strain YPW-V2]
ATGCAGCTAAACGAAAAAAATATGGAATTCATGCAAATCGCCATGAAATACCTGCCAGAAGCCAAACAGCAGCTTGACGA
AGCAGGCATTGAACTATCCATGGAAATGATCCAGCCATTCATGAACCTATTCACCAAAGTCATGAACGAAGCCTACGAAA
TGGGTAAAGCGGATGCTTTGAAAGAGAGTGAGTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A169G1N2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.77

95.313

0.703