Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | TTJL18_RS10210 | Genome accession | NC_017587 |
| Coordinates | 1896182..1896490 (+) | Length | 102 a.a. |
| NCBI ID | WP_041444468.1 | Uniprot ID | - |
| Organism | Thermus thermophilus JL-18 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1891182..1901490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTJL18_RS10180 (TtJL18_2047) | - | 1892264..1892728 (+) | 465 | WP_014630400.1 | hypothetical protein | - |
| TTJL18_RS10185 (TtJL18_2048) | pfkA | 1892705..1893673 (-) | 969 | WP_014630401.1 | 6-phosphofructokinase | - |
| TTJL18_RS10190 (TtJL18_2049) | rsmI | 1893670..1894464 (-) | 795 | WP_014630402.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| TTJL18_RS10195 (TtJL18_2050) | - | 1894466..1894960 (-) | 495 | WP_014630403.1 | hypothetical protein | - |
| TTJL18_RS10200 (TtJL18_2051) | - | 1895023..1895550 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| TTJL18_RS10205 (TtJL18_2052) | - | 1895583..1896209 (+) | 627 | WP_014630404.1 | YcxB family protein | - |
| TTJL18_RS10210 (TtJL18_2053) | comEA | 1896182..1896490 (+) | 309 | WP_041444468.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| TTJL18_RS10215 (TtJL18_2054) | comA/comEC | 1896487..1898520 (+) | 2034 | WP_041444469.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| TTJL18_RS10220 (TtJL18_2055) | - | 1898508..1899317 (-) | 810 | WP_014630406.1 | ParB/RepB/Spo0J family partition protein | - |
| TTJL18_RS10225 (TtJL18_2056) | soj | 1899301..1900050 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| TTJL18_RS10230 (TtJL18_2057) | rsmG | 1900044..1900793 (-) | 750 | WP_014630407.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10933.21 Da Isoelectric Point: 10.3435
>NTDB_id=49135 TTJL18_RS10210 WP_041444468.1 1896182..1896490(+) (comEA) [Thermus thermophilus JL-18]
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=49135 TTJL18_RS10210 WP_041444468.1 1896182..1896490(+) (comEA) [Thermus thermophilus JL-18]
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |