Detailed information NTG0049131

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: MSA_RS10785
• Genome accession: NC_021486
• Coordinates: 2086906..2088015 (+)
• Length: 369 a.a.
• NCBI ID: WP_016481395.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae ILRI005
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2081906..2093015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MSA_RS10760 (MSA_22290)	-	2082278..2083117 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
MSA_RS10765 (MSA_22300)	pgsA	2083117..2083659 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MSA_RS10770 (MSA_22310)	-	2083782..2085065 (-)	1284	WP_016481393.1	pitrilysin family protein	-
MSA_RS10775 (MSA_22320)	-	2085067..2086311 (-)	1245	WP_016481394.1	pitrilysin family protein	-
MSA_RS10780 (MSA_22330)	yaaA	2086550..2086903 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
MSA_RS10785 (MSA_22340)	recF	2086906..2088015 (+)	1110	WP_016481395.1	DNA replication/repair protein RecF	Machinery gene
MSA_RS10790 (MSA_22350)	-	2088027..2088893 (-)	867	WP_000398683.1	GRP family sugar transporter	-
MSA_RS10795 (MSA_22360)	-	2088949..2089611 (-)	663	WP_016481396.1	helix-turn-helix transcriptional regulator	-
MSA_RS10800 (MSA_22370)	guaB	2089687..2091168 (-)	1482	WP_016481397.1	IMP dehydrogenase	-
MSA_RS10805 (MSA_22380)	-	2091325..2091810 (-)	486	WP_001034427.1	arginine repressor	-
MSA_RS10810 (MSA_22390)	-	2091820..2092500 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42485.30 Da
• Isoelectric Point: 7.3132

>NTDB_id=49131 MSA_RS10785 WP_016481395.1 2086906..2088015(+) (recF) [Streptococcus agalactiae ILRI005]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNISDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=49131 MSA_RS10785 WP_016481395.1 2086906..2088015(+) (recF) [Streptococcus agalactiae ILRI005]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTGTCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATATTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.912	98.374	0.629
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444