Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   KHA81_RS15135 Genome accession   NZ_CP074391
Coordinates   3077919..3078797 (-) Length   292 a.a.
NCBI ID   WP_024085740.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain L-17     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3072919..3083797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHA81_RS15100 - 3073164..3073640 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  KHA81_RS15105 - 3073640..3073924 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  KHA81_RS15110 mnhG 3073908..3074282 (+) 375 WP_015387785.1 monovalent cation/H(+) antiporter subunit G -
  KHA81_RS15115 - 3074322..3074705 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  KHA81_RS15120 comA 3074727..3075371 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  KHA81_RS15125 comP 3075452..3077743 (-) 2292 WP_015387784.1 histidine kinase Regulator
  KHA81_RS15130 comX 3077755..3077919 (-) 165 WP_007613432.1 competence pheromone ComX -
  KHA81_RS15135 comQ 3077919..3078797 (-) 879 WP_024085740.1 polyprenyl synthetase family protein Regulator
  KHA81_RS15140 degQ 3078982..3079122 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  KHA81_RS15145 - 3079588..3079929 (+) 342 WP_014305721.1 hypothetical protein -
  KHA81_RS15150 - 3079936..3081156 (-) 1221 WP_015387782.1 EAL and HDOD domain-containing protein -
  KHA81_RS15155 - 3081286..3082752 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  KHA81_RS15160 - 3082770..3083321 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33523.83 Da        Isoelectric Point: 5.2659

>NTDB_id=491240 KHA81_RS15135 WP_024085740.1 3077919..3078797(-) (comQ) [Bacillus amyloliquefaciens strain L-17]
MKEIVAHNICNTNLKMYLLKFIASKDSFGFAELAYQHYKAFNGRDTEAILKLAAGIELLVLSYDIYDDLEDNDNLKMEWM
KTGLPITLNTVTALYTLSIQVMNQVSENPDFLKQILNFALSSIEGQQDDILNAPQTEEECLKMIKNKSGSLTAMPCVMGA
MLATGKLNPIVQSYSYELGIISQIDNDYQGLFYLNNDFVQRKNTLAYLYLKKRFNKASEEILQWYENPELFKTLKTRDIK
KKLIEAGVTQYLLVLKHLSLKKLKSKIFELEIERNKTEALLNAIVNLEEDEK

Nucleotide


Download         Length: 879 bp        

>NTDB_id=491240 KHA81_RS15135 WP_024085740.1 3077919..3078797(-) (comQ) [Bacillus amyloliquefaciens strain L-17]
ATGAAGGAAATTGTGGCGCACAATATATGCAATACTAACTTGAAAATGTACCTTCTAAAATTTATTGCATCAAAAGATTC
ATTTGGATTTGCTGAATTGGCATATCAACATTACAAGGCGTTCAATGGCAGAGACACAGAGGCGATTTTAAAGTTAGCCG
CAGGTATAGAATTATTAGTCCTGTCATATGACATTTATGATGATTTAGAAGATAATGATAATCTGAAAATGGAATGGATG
AAAACAGGTCTCCCCATTACGCTGAATACTGTAACGGCCCTCTATACATTAAGTATACAGGTTATGAATCAGGTTAGTGA
AAATCCGGATTTTCTTAAGCAAATATTAAACTTTGCTTTGAGTTCAATTGAGGGCCAGCAAGATGATATTTTGAATGCAC
CGCAAACTGAAGAAGAGTGCTTGAAAATGATTAAGAATAAATCGGGCTCTTTAACTGCAATGCCTTGCGTTATGGGAGCG
ATGCTGGCGACAGGAAAGTTAAACCCAATCGTTCAATCATATTCATATGAACTCGGTATAATATCCCAGATTGATAATGA
TTATCAAGGTTTGTTTTACTTAAATAATGATTTTGTTCAACGCAAAAATACACTTGCTTATTTATACTTAAAAAAGAGAT
TCAATAAAGCTTCTGAAGAAATCTTACAATGGTATGAAAACCCGGAGTTATTCAAAACCTTAAAGACTCGAGACATAAAA
AAGAAATTAATTGAAGCAGGTGTAACCCAATACTTATTGGTTTTGAAACATTTGTCGTTAAAAAAATTAAAAAGTAAGAT
ATTTGAATTGGAGATAGAAAGAAATAAAACGGAAGCTTTATTAAATGCGATTGTTAATTTAGAGGAGGATGAAAAATAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(37-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.06

96.233

0.414