Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   KHA81_RS08780 Genome accession   NZ_CP074391
Coordinates   1723181..1724449 (+) Length   422 a.a.
NCBI ID   WP_007611459.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain L-17     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718181..1729449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHA81_RS08755 pyrH 1718976..1719698 (+) 723 WP_003154213.1 UMP kinase -
  KHA81_RS08760 frr 1719701..1720258 (+) 558 WP_003154212.1 ribosome recycling factor -
  KHA81_RS08765 - 1720384..1721166 (+) 783 WP_003154211.1 isoprenyl transferase -
  KHA81_RS08770 - 1721170..1721967 (+) 798 WP_021734132.1 phosphatidate cytidylyltransferase -
  KHA81_RS08775 dxr 1722023..1723174 (+) 1152 WP_003154208.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  KHA81_RS08780 eeP 1723181..1724449 (+) 1269 WP_007611459.1 RIP metalloprotease RseP Regulator
  KHA81_RS08785 proS 1724481..1726175 (+) 1695 WP_015388230.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46540.43 Da        Isoelectric Point: 6.5185

>NTDB_id=491190 KHA81_RS08780 WP_007611459.1 1723181..1724449(+) (eeP) [Bacillus amyloliquefaciens strain L-17]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=491190 KHA81_RS08780 WP_007611459.1 1723181..1724449(+) (eeP) [Bacillus amyloliquefaciens strain L-17]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGAGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATTATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCAAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCTGCTGCAGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGATGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCTTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATCCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4