Detailed information NTG0490871

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KFQ18_RS17035
• Genome accession: NZ_CP074356
• Coordinates: 3574088..3575362 (-)
• Length: 424 a.a.
• NCBI ID: WP_275877362.1
• Uniprot ID: -
• Organism: Escherichia coli strain XJ6.1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3569088..3580362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFQ18_RS17025 (KFQ18_16860)	hupB	3571065..3571337 (-)	273	WP_001043542.1	nucleoid-associated protein HU-beta	-
KFQ18_RS17030 (KFQ18_16865)	lon	3571546..3573900 (-)	2355	WP_275877361.1	endopeptidase La	-
KFQ18_RS17035 (KFQ18_16870)	clpX	3574088..3575362 (-)	1275	WP_275877362.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
KFQ18_RS17040 (KFQ18_16875)	clpP	3575488..3576111 (-)	624	WP_000122253.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
KFQ18_RS17045 (KFQ18_16880)	tig	3576357..3577655 (-)	1299	WP_001198386.1	trigger factor	-
KFQ18_RS17050 (KFQ18_16885)	bolA	3577999..3578316 (-)	318	WP_000973448.1	transcriptional regulator BolA	-
KFQ18_RS17055 (KFQ18_16890)	yajG	3578621..3579199 (+)	579	WP_275877363.1	lipoprotein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 46355.07 Da
• Isoelectric Point: 4.9982

>NTDB_id=490871 KFQ18_RS17035 WP_275877362.1 3574088..3575362(-) (clpX) [Escherichia coli strain XJ6.1]
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRIHLDDYVIG
QEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT
SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEE
ALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDE
SVIDGQSKPLLIYGKPEAQQASGE

Nucleotide

• Length: 1275 bp

>NTDB_id=490871 KFQ18_RS17035 WP_275877362.1 3574088..3575362(-) (clpX) [Escherichia coli strain XJ6.1]
ATGACAGATAAACGCAAAGATGGCTCAGGCAAATTGCTGTATTGCTCTTTTTGCGGCAAAAGCCAGCATGAAGTGCGCAA
GCTGATTGCCGGTCCATCCGTGTATATCTGCGACGAATGTGTTGATTTATGTAACGACATCATTCGCGAAGAGATTAAAG
AAGTTGCACCGCATCGTGAACGCAGTGCGCTACCGACGCCGCATGAAATTCGTATCCACCTGGACGATTACGTTATCGGT
CAGGAACAGGCGAAAAAAGTGCTGGCGGTCGCGGTATACAACCACTACAAACGTCTGCGTAACGGCGATACCAGCAATGG
CGTCGAGTTGGGCAAAAGTAACATTCTGCTGATCGGTCCGACCGGTTCCGGTAAAACGCTGCTGGCCGAAACGCTGGCGC
GCCTGCTGGACGTCCCGTTCACCATGGCCGACGCAACCACGCTGACCGAAGCCGGTTATGTGGGCGAAGACGTTGAAAAC
ATCATTCAGAAGCTGTTGCAGAAGTGCGATTACGACGTACAGAAAGCGCAGCGCGGGATTGTCTACATCGATGAAATCGA
CAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCTCTGTTGAAAC
TGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTAGATACC
TCTAAGATCCTGTTTATTTGTGGTGGTGCGTTCGCTGGTCTGGATAAAGTCATTTCCCATCGTGTAGAAACCGGCTCCGG
CATTGGTTTTGGCGCGACGGTAAAAGCGAAGTCCGACAAAGCAAGCGAAGGCGAGCTGCTGGCGCAGGTTGAACCGGAAG
ATCTGATCAAGTTTGGTCTGATCCCTGAGTTCATTGGTCGTCTGCCGGTTGTCGCAACGTTGAATGAACTGAGCGAAGAA
GCTCTGATTCAGATCCTCAAAGAGCCGAAAAACGCCCTGACCAAGCAGTATCAGGCGCTGTTTAATTTGGAAGGCGTGGA
TCTGGAATTCCGTGACGAGGCGCTGGATGCTATCGCTAAGAAAGCGATGGCGCGTAAAACCGGTGCCCGTGGCCTGCGTT
CCATCGTAGAAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAA
TCGGTAATTGATGGTCAAAGCAAGCCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (13-50)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.85	94.575	0.566
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.392	96.226	0.533