Detailed information
Bioinformatically predicted
Overview
| Name | amiE | Type | Regulator |
| Locus tag | SESEC_RS08825 | Genome accession | NC_017582 |
| Coordinates | 1857052..1858122 (-) | Length | 356 a.a. |
| NCBI ID | WP_012516279.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus ATCC 35246 | ||
| Function | internalize XIP (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1856804..1909958 | 1857052..1858122 | within | 0 |
Gene organization within MGE regions
Location: 1856804..1909958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SESEC_RS08825 (SeseC_02257) | amiE | 1857052..1858122 (-) | 1071 | WP_012516279.1 | ABC transporter ATP-binding protein | Regulator |
| SESEC_RS08830 (SeseC_02258) | amiD | 1858131..1859057 (-) | 927 | WP_014623462.1 | oligopeptide ABC transporter permease OppC | Regulator |
| SESEC_RS08835 (SeseC_02259) | amiC | 1859057..1860556 (-) | 1500 | WP_014623463.1 | ABC transporter permease | Regulator |
| SESEC_RS08840 (SeseC_02260) | amiA3 | 1860620..1862596 (-) | 1977 | WP_014623464.1 | peptide ABC transporter substrate-binding protein | Regulator |
| SESEC_RS08845 (SeseC_02261) | pbp3 | 1862904..1864142 (+) | 1239 | WP_014623465.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| SESEC_RS08850 (SeseC_02262) | pbp3 | 1864465..1865700 (+) | 1236 | WP_014623466.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| SESEC_RS08855 (SeseC_02265) | - | 1865784..1866965 (+) | 1182 | WP_038673980.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| SESEC_RS08860 (SeseC_02266) | sufB | 1867125..1868543 (-) | 1419 | WP_012516286.1 | Fe-S cluster assembly protein SufB | - |
| SESEC_RS08865 (SeseC_02267) | sufU | 1868583..1869020 (-) | 438 | WP_038673978.1 | Fe-S cluster assembly sulfur transfer protein SufU | - |
| SESEC_RS08870 (SeseC_02268) | - | 1869007..1870233 (-) | 1227 | WP_014623468.1 | cysteine desulfurase | - |
| SESEC_RS08875 (SeseC_02269) | sufD | 1870260..1871522 (-) | 1263 | WP_014623469.1 | Fe-S cluster assembly protein SufD | - |
| SESEC_RS08880 (SeseC_02270) | sufC | 1871613..1872383 (-) | 771 | WP_014623470.1 | Fe-S cluster assembly ATPase SufC | - |
| SESEC_RS08885 (SeseC_02271) | - | 1872504..1873661 (-) | 1158 | WP_038674746.1 | glycosyltransferase family 4 protein | - |
| SESEC_RS08890 (SeseC_02272) | mecA | 1873668..1874432 (-) | 765 | WP_014623472.1 | adaptor protein MecA | Regulator |
| SESEC_RS08895 (SeseC_02273) | - | 1874552..1875391 (-) | 840 | WP_014623473.1 | undecaprenyl-diphosphate phosphatase | - |
| SESEC_RS08900 (SeseC_02275) | - | 1875707..1877275 (+) | 1569 | WP_014623474.1 | ABC transporter substrate-binding protein/permease | - |
| SESEC_RS08905 (SeseC_02277) | - | 1877268..1878008 (+) | 741 | WP_014623475.1 | amino acid ABC transporter ATP-binding protein | - |
| SESEC_RS10605 | - | 1878335..1878451 (+) | 117 | WP_012677375.1 | putative metal homeostasis protein | - |
| SESEC_RS08910 (SeseC_02279) | - | 1878966..1879856 (-) | 891 | WP_012677374.1 | SPFH domain-containing protein | - |
| SESEC_RS08915 (SeseC_02280) | - | 1880120..1881784 (-) | 1665 | WP_014623477.1 | DAK2 domain-containing protein | - |
| SESEC_RS08920 (SeseC_02281) | - | 1881784..1882149 (-) | 366 | WP_012516300.1 | Asp23/Gls24 family envelope stress response protein | - |
| SESEC_RS08925 (SeseC_02282) | rpmB | 1882301..1882489 (-) | 189 | WP_002982870.1 | 50S ribosomal protein L28 | - |
| SESEC_RS08930 (SeseC_02283) | - | 1882935..1884236 (-) | 1302 | WP_014623479.1 | ISLre2 family transposase | - |
| SESEC_RS08935 (SeseC_02284) | - | 1884386..1884685 (-) | 300 | WP_014623480.1 | hypothetical protein | - |
| SESEC_RS08940 (SeseC_02285) | - | 1884697..1885947 (-) | 1251 | WP_014623481.1 | site-specific DNA-methyltransferase | - |
| SESEC_RS08945 (SeseC_02287) | - | 1885959..1887602 (-) | 1644 | WP_038673973.1 | helical hairpin domain-containing protein | - |
| SESEC_RS08950 (SeseC_02288) | - | 1887565..1887948 (-) | 384 | WP_014623483.1 | plasmid mobilization protein | - |
| SESEC_RS08955 | - | 1887969..1888178 (-) | 210 | WP_154224854.1 | hypothetical protein | - |
| SESEC_RS08960 (SeseC_02289) | - | 1888292..1888591 (-) | 300 | WP_014623484.1 | hypothetical protein | - |
| SESEC_RS08965 (SeseC_02290) | - | 1888643..1891882 (-) | 3240 | WP_038673969.1 | PBECR4 domain-containing protein | - |
| SESEC_RS08970 (SeseC_02291) | - | 1891921..1893966 (-) | 2046 | WP_038673967.1 | VirD4-like conjugal transfer protein, CD1115 family | - |
| SESEC_RS08975 (SeseC_02292) | - | 1893966..1894457 (-) | 492 | WP_014623487.1 | DUF3801 domain-containing protein | - |
| SESEC_RS08980 (SeseC_02293) | - | 1894479..1895261 (-) | 783 | WP_014623488.1 | hypothetical protein | - |
| SESEC_RS08985 (SeseC_02294) | - | 1895261..1895533 (-) | 273 | WP_014623489.1 | hypothetical protein | - |
| SESEC_RS08990 (SeseC_02295) | - | 1895555..1896157 (-) | 603 | WP_038673964.1 | hypothetical protein | - |
| SESEC_RS08995 (SeseC_02296) | - | 1896181..1898877 (-) | 2697 | WP_014623491.1 | phage tail tip lysozyme | - |
| SESEC_RS10695 (SeseC_02297) | - | 1898910..1899440 (+) | 531 | WP_154224853.1 | hypothetical protein | - |
| SESEC_RS09010 (SeseC_02298) | - | 1899634..1901985 (-) | 2352 | WP_014623493.1 | VirB4-like conjugal transfer ATPase, CD1110 family | - |
| SESEC_RS09015 (SeseC_02299) | - | 1901966..1902325 (-) | 360 | WP_037582122.1 | hypothetical protein | - |
| SESEC_RS10970 (SeseC_02300) | - | 1902681..1902914 (-) | 234 | WP_014623495.1 | hypothetical protein | - |
| SESEC_RS09025 (SeseC_02301) | - | 1903075..1903827 (-) | 753 | WP_014623496.1 | hypothetical protein | - |
| SESEC_RS09030 (SeseC_02302) | - | 1903876..1904442 (-) | 567 | WP_014623497.1 | hypothetical protein | - |
| SESEC_RS09035 (SeseC_02303) | - | 1904547..1904774 (-) | 228 | WP_000447009.1 | hypothetical protein | - |
| SESEC_RS09040 (SeseC_02304) | - | 1905051..1908572 (-) | 3522 | WP_014623499.1 | SspB-related isopeptide-forming adhesin | - |
| SESEC_RS09045 (SeseC_02305) | - | 1908637..1909275 (-) | 639 | WP_038673957.1 | LPXTG cell wall anchor domain-containing protein | - |
| SESEC_RS09050 (SeseC_02306) | - | 1909290..1909589 (-) | 300 | WP_038673954.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39734.86 Da Isoelectric Point: 6.1118
>NTDB_id=49072 SESEC_RS08825 WP_012516279.1 1857052..1858122(-) (amiE) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MTEKQEIILSAKNIVVEFDVRDRVLTAIRDVSLDLYKGEVLAVVGESGSGKSVLTKTFTGMLEANGRVASGTITYAGQEL
TELKNHKDWEAIRGSKIATIFQDPMTSLDPIQTIGSQITEVIVKHQKKSRSEAKALAIDYMTRVGIPEPEKRFGEYPFQY
SGGMRQRIVIAIALACKPDILICDEPTTALDVTIQAQIIDLLKTLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIIE
YGKVEEIFYDPRHPYTWSLLSSLPQLADEKGVLFSIPGTPPSLYKPIVGDAFAPRSQYAMAIDFEETVPRFTISDTHWAK
TWLLHPDAPKVQKPAVIQDLHQKILKKMSRQEEGNV
MTEKQEIILSAKNIVVEFDVRDRVLTAIRDVSLDLYKGEVLAVVGESGSGKSVLTKTFTGMLEANGRVASGTITYAGQEL
TELKNHKDWEAIRGSKIATIFQDPMTSLDPIQTIGSQITEVIVKHQKKSRSEAKALAIDYMTRVGIPEPEKRFGEYPFQY
SGGMRQRIVIAIALACKPDILICDEPTTALDVTIQAQIIDLLKTLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIIE
YGKVEEIFYDPRHPYTWSLLSSLPQLADEKGVLFSIPGTPPSLYKPIVGDAFAPRSQYAMAIDFEETVPRFTISDTHWAK
TWLLHPDAPKVQKPAVIQDLHQKILKKMSRQEEGNV
Nucleotide
Download Length: 1071 bp
>NTDB_id=49072 SESEC_RS08825 WP_012516279.1 1857052..1858122(-) (amiE) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGACTGAAAAACAAGAAATTATATTAAGTGCTAAAAATATTGTTGTAGAGTTTGATGTGCGTGATCGTGTACTGACCGC
TATTCGTGATGTTTCTCTTGATTTGTATAAGGGAGAGGTATTGGCTGTTGTTGGTGAGTCAGGCTCTGGCAAGTCTGTTT
TAACTAAGACATTTACAGGAATGCTGGAGGCAAATGGACGTGTTGCTTCAGGGACGATAACCTATGCAGGTCAAGAACTA
ACAGAGCTTAAAAATCATAAAGACTGGGAAGCTATTCGCGGCTCTAAAATTGCCACTATCTTTCAGGACCCAATGACTAG
TCTAGATCCGATTCAAACGATTGGCAGCCAGATTACTGAGGTTATTGTTAAGCATCAGAAAAAATCTAGATCAGAGGCTA
AGGCTTTAGCAATCGACTATATGACAAGGGTCGGTATTCCTGAGCCAGAAAAGCGTTTTGGAGAGTATCCTTTCCAATAT
TCTGGCGGTATGAGACAGCGTATTGTTATTGCCATTGCCCTAGCTTGTAAGCCAGATATTCTGATCTGTGATGAGCCGAC
AACAGCTCTTGACGTTACCATCCAGGCTCAGATTATTGATCTATTAAAGACGCTTCAAAAAGAGTATCACTTCACCATTA
TCTTTATCACGCATGACCTAGGAGTGGTTGCAAGTATTGCTGATAAGGTTGCTGTTATGTACGCAGGGGAGATTATTGAA
TACGGAAAGGTTGAGGAAATCTTCTATGATCCTCGTCACCCCTACACATGGAGCTTATTATCTAGCCTACCGCAATTGGC
AGATGAAAAGGGCGTTCTGTTTTCAATTCCAGGGACACCTCCGTCCCTATACAAGCCGATTGTTGGTGATGCCTTTGCGC
CACGCTCTCAGTATGCTATGGCCATTGATTTTGAAGAAACAGTTCCTCGTTTTACGATCAGTGACACGCACTGGGCAAAA
ACCTGGCTCCTACACCCAGATGCTCCTAAGGTTCAAAAGCCAGCTGTTATTCAGGATTTACACCAAAAAATATTGAAAAA
AATGTCACGCCAGGAGGAAGGAAATGTCTGA
ATGACTGAAAAACAAGAAATTATATTAAGTGCTAAAAATATTGTTGTAGAGTTTGATGTGCGTGATCGTGTACTGACCGC
TATTCGTGATGTTTCTCTTGATTTGTATAAGGGAGAGGTATTGGCTGTTGTTGGTGAGTCAGGCTCTGGCAAGTCTGTTT
TAACTAAGACATTTACAGGAATGCTGGAGGCAAATGGACGTGTTGCTTCAGGGACGATAACCTATGCAGGTCAAGAACTA
ACAGAGCTTAAAAATCATAAAGACTGGGAAGCTATTCGCGGCTCTAAAATTGCCACTATCTTTCAGGACCCAATGACTAG
TCTAGATCCGATTCAAACGATTGGCAGCCAGATTACTGAGGTTATTGTTAAGCATCAGAAAAAATCTAGATCAGAGGCTA
AGGCTTTAGCAATCGACTATATGACAAGGGTCGGTATTCCTGAGCCAGAAAAGCGTTTTGGAGAGTATCCTTTCCAATAT
TCTGGCGGTATGAGACAGCGTATTGTTATTGCCATTGCCCTAGCTTGTAAGCCAGATATTCTGATCTGTGATGAGCCGAC
AACAGCTCTTGACGTTACCATCCAGGCTCAGATTATTGATCTATTAAAGACGCTTCAAAAAGAGTATCACTTCACCATTA
TCTTTATCACGCATGACCTAGGAGTGGTTGCAAGTATTGCTGATAAGGTTGCTGTTATGTACGCAGGGGAGATTATTGAA
TACGGAAAGGTTGAGGAAATCTTCTATGATCCTCGTCACCCCTACACATGGAGCTTATTATCTAGCCTACCGCAATTGGC
AGATGAAAAGGGCGTTCTGTTTTCAATTCCAGGGACACCTCCGTCCCTATACAAGCCGATTGTTGGTGATGCCTTTGCGC
CACGCTCTCAGTATGCTATGGCCATTGATTTTGAAGAAACAGTTCCTCGTTTTACGATCAGTGACACGCACTGGGCAAAA
ACCTGGCTCCTACACCCAGATGCTCCTAAGGTTCAAAAGCCAGCTGTTATTCAGGATTTACACCAAAAAATATTGAAAAA
AATGTCACGCCAGGAGGAAGGAAATGTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| amiE | Streptococcus salivarius strain HSISS4 |
80 |
100 |
0.809 |
| amiE | Streptococcus thermophilus LMG 18311 |
78.889 |
100 |
0.798 |
| amiE | Streptococcus thermophilus LMD-9 |
78.889 |
100 |
0.798 |
| oppD | Streptococcus mutans UA159 |
56.456 |
93.539 |
0.528 |