Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   KE639_RS20390 Genome accession   NZ_CP074111
Coordinates   4409545..4410669 (-) Length   374 a.a.
NCBI ID   WP_030404779.1    Uniprot ID   A0A6B3QRH4
Organism   Streptomyces sp. V17-9     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4404545..4415669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS20365 (KE639_04067) cseB 4405266..4405970 (-) 705 WP_165287730.1 two-component system response regulator CseB -
  KE639_RS20370 (KE639_04068) - 4406094..4406771 (-) 678 WP_176154385.1 hypothetical protein -
  KE639_RS20375 (KE639_04069) - 4406759..4407292 (-) 534 WP_003975479.1 SigE family RNA polymerase sigma factor -
  KE639_RS20380 (KE639_04070) - 4407591..4408517 (-) 927 WP_125629511.1 A/G-specific adenine glycosylase -
  KE639_RS20385 (KE639_04071) - 4408676..4409524 (+) 849 WP_212730806.1 hypothetical protein -
  KE639_RS20390 (KE639_04072) disA 4409545..4410669 (-) 1125 WP_030404779.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  KE639_RS20395 (KE639_04073) radA/sms 4410751..4412160 (-) 1410 WP_102932190.1 DNA repair protein RadA Machinery gene
  KE639_RS20400 (KE639_04074) - 4412778..4414544 (+) 1767 WP_212730807.1 hypothetical protein -
  KE639_RS20405 (KE639_04075) - 4414849..4415661 (-) 813 WP_212730808.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40084.82 Da        Isoelectric Point: 5.0058

>NTDB_id=490618 KE639_RS20390 WP_030404779.1 4409545..4410669(-) (disA) [Streptomyces sp. V17-9]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLIVLGSDKTVEQMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=490618 KE639_RS20390 WP_030404779.1 4409545..4410669(-) (disA) [Streptomyces sp. V17-9]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACGTCCCTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGTCTGATCGTGC
TGGGCTCCGACAAGACCGTCGAGCAGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCCGACCTGTCGAAGATCCTGCGGGCCGGGGTGCAGCTCCTTCC
GGATCCCACCATTCCGACGGAGGAGACCGGTACGCGGCACCGGACCGCCGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TGGTGTCGGTTTCGCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGGCAGCGGCGGGTGCTGGAGGACTCGGCGGCG
ATCCTGTCGCGGGCCAATCAGGCACTGGCGACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGGCGGCTGCTCGCGCTGCAGTTGGACGAGCTGATCGCC
GGGGTGGAGCCCGAACGCGAGCTGGTCGTGCGGGACTACGTACCGGAGCCGACCGCCAAGCGGTCCCGTACGGTCGACGA
GGCGCTCGCCGAGCTGGACAAGCTCAGCCACGCGGAACTGCTGGAACTGTCGACCGTGGCCCGGGCCCTGGGCTACACCG
GGTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGTGTCGACGACCTGCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6B3QRH4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447