Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IHV08_RS02160 Genome accession   NZ_CP062497
Coordinates   424219..425169 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain CV16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 419219..430169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IHV08_RS02135 (IHV08_02135) rapC 420678..421826 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  IHV08_RS02140 (IHV08_02140) phrC 421810..421932 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  IHV08_RS02145 (IHV08_02145) yczM 422032..422121 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  IHV08_RS02150 (IHV08_02150) yczN 422203..422316 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  IHV08_RS02155 (IHV08_02155) thrD 422470..423834 (-) 1365 WP_128992406.1 aspartate kinase -
  IHV08_RS02160 (IHV08_02160) ceuB 424219..425169 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  IHV08_RS02165 (IHV08_02165) yclO 425162..426109 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  IHV08_RS02170 (IHV08_02170) yclP 426103..426861 (+) 759 WP_192858200.1 petrobactin ABC transporter ATP-binding protein YclP -
  IHV08_RS02175 (IHV08_02175) yclQ 426883..427836 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  IHV08_RS02180 (IHV08_02180) cdaE 427883..429301 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=490419 IHV08_RS02160 WP_014475804.1 424219..425169(+) (ceuB) [Bacillus subtilis strain CV16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=490419 IHV08_RS02160 WP_014475804.1 424219..425169(+) (ceuB) [Bacillus subtilis strain CV16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525