Detailed information NTG0490417

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IHV08_RS02135
• Genome accession: NZ_CP062497
• Coordinates: 420678..421826 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain CV16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415678..426826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHV08_RS02115 (IHV08_02115)	yclH	416053..416733 (-)	681	WP_032722912.1	ABC transporter ATP-binding protein	-
IHV08_RS02120 (IHV08_02120)	yclI	416749..418215 (-)	1467	WP_192858198.1	ABC transporter permease	-
IHV08_RS02125 (IHV08_02125)	yclJ	418424..419107 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
IHV08_RS02130 (IHV08_02130)	yclK	419094..420515 (+)	1422	WP_192858199.1	two-component system sensor histidine kinase YclK	-
IHV08_RS02135 (IHV08_02135)	rapC	420678..421826 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
IHV08_RS02140 (IHV08_02140)	phrC	421810..421932 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
IHV08_RS02145 (IHV08_02145)	yczM	422032..422121 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
IHV08_RS02150 (IHV08_02150)	yczN	422203..422316 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
IHV08_RS02155 (IHV08_02155)	thrD	422470..423834 (-)	1365	WP_128992406.1	aspartate kinase	-
IHV08_RS02160 (IHV08_02160)	ceuB	424219..425169 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
IHV08_RS02165 (IHV08_02165)	yclO	425162..426109 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=490417 IHV08_RS02135 WP_003246686.1 420678..421826(+) (rapC) [Bacillus subtilis strain CV16]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=490417 IHV08_RS02135 WP_003246686.1 420678..421826(+) (rapC) [Bacillus subtilis strain CV16]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571