Detailed information NTG0049037

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: SESEC_RS01475
• Genome accession: NC_017582
• Coordinates: 291870..292916 (+)
• Length: 348 a.a.
• NCBI ID: WP_014622278.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus ATCC 35246
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 286870..297916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SESEC_RS01460 (SeseC_00333)	-	288078..289736 (+)	1659	WP_012678547.1	peptide ABC transporter substrate-binding protein	-
SESEC_RS01465 (SeseC_00335)	-	289903..290817 (+)	915	WP_012514937.1	ABC transporter permease	-
SESEC_RS01470 (SeseC_00336)	-	290827..291858 (+)	1032	WP_014622277.1	ABC transporter permease	-
SESEC_RS01475 (SeseC_00337)	oppD	291870..292916 (+)	1047	WP_014622278.1	ABC transporter ATP-binding protein	Regulator
SESEC_RS01480 (SeseC_00338)	amiF	292916..293851 (+)	936	WP_012514940.1	ABC transporter ATP-binding protein	Regulator
SESEC_RS01485 (SeseC_00340)	rnjA	294481..296163 (-)	1683	WP_012514941.1	ribonuclease J1	-
SESEC_RS01490 (SeseC_00341)	-	296165..296395 (-)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
SESEC_RS01495 (SeseC_00342)	tsaB	296681..297379 (+)	699	WP_014622280.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SESEC_RS01500 (SeseC_00344)	rimI	297382..297807 (+)	426	WP_014622281.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38542.47 Da
• Isoelectric Point: 6.8385

>NTDB_id=49037 SESEC_RS01475 WP_014622278.1 291870..292916(+) (oppD) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=49037 SESEC_RS01475 WP_014622278.1 291870..292916(+) (oppD) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGTTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGAAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAAGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTTCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGTGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAAGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537