Detailed information NTG0049026

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BSA_RS10650
• Genome accession: NC_021485
• Coordinates: 2115842..2116951 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae 09mas018883
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2110842..2121951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSA_RS10625 (BSA_21630)	-	2111214..2112053 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
BSA_RS10630 (BSA_21640)	pgsA	2112053..2112595 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BSA_RS10635 (BSA_21650)	-	2112718..2114001 (-)	1284	WP_000217762.1	pitrilysin family protein	-
BSA_RS10640 (BSA_21660)	-	2114003..2115247 (-)	1245	WP_000706188.1	pitrilysin family protein	-
BSA_RS10645 (BSA_21670)	yaaA	2115486..2115839 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
BSA_RS10650 (BSA_21680)	recF	2115842..2116951 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
BSA_RS10655 (BSA_21690)	-	2116963..2117829 (-)	867	WP_000398683.1	GRP family sugar transporter	-
BSA_RS10660 (BSA_21700)	-	2117885..2118547 (-)	663	WP_001868421.1	helix-turn-helix transcriptional regulator	-
BSA_RS10665 (BSA_21710)	guaB	2118622..2120103 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
BSA_RS10670 (BSA_21720)	-	2120260..2120745 (-)	486	WP_001034427.1	arginine repressor	-
BSA_RS10675 (BSA_21730)	-	2120755..2121435 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=49026 BSA_RS10650 WP_000264870.1 2115842..2116951(+) (recF) [Streptococcus agalactiae 09mas018883]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=49026 BSA_RS10650 WP_000264870.1 2115842..2116951(+) (recF) [Streptococcus agalactiae 09mas018883]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447