Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   IF751_RS02705 Genome accession   NZ_CP062407
Coordinates   580589..581575 (-) Length   328 a.a.
NCBI ID   WP_020977132.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_NP_181     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 575589..586575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF751_RS02680 (IF751_02665) - 575639..576232 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  IF751_RS02685 (IF751_02670) - 576336..576701 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  IF751_RS02690 (IF751_02675) yjbH 576724..577530 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  IF751_RS02695 (IF751_02680) tnpA 577653..578138 (-) 486 WP_000093393.1 IS200/IS605 family transposase -
  IF751_RS02700 (IF751_02685) pepF 578733..580541 (-) 1809 WP_020977133.1 oligoendopeptidase F -
  IF751_RS02705 (IF751_02690) coiA 580589..581575 (-) 987 WP_020977132.1 competence protein CoiA family protein Machinery gene
  IF751_RS02710 (IF751_02695) mecA 581696..582415 (-) 720 WP_001217728.1 adaptor protein MecA -
  IF751_RS02715 (IF751_02700) spxA 582786..583181 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  IF751_RS02720 (IF751_02705) trpS 583476..584465 (+) 990 WP_000448931.1 tryptophan--tRNA ligase -
  IF751_RS02725 (IF751_02710) opp4C 584507..585388 (-) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  IF751_RS02730 (IF751_02715) - 585400..585903 (-) 504 Protein_541 ABC transporter permease -
  IF751_RS02735 (IF751_02720) tnpA 586024..586509 (-) 486 WP_000093393.1 IS200/IS605 family transposase -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38634.19 Da        Isoelectric Point: 9.6530

>NTDB_id=489513 IF751_RS02705 WP_020977132.1 580589..581575(-) (coiA) [Staphylococcus aureus strain NAS_NP_181]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EMEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=489513 IF751_RS02705 WP_020977132.1 580589..581575(-) (coiA) [Staphylococcus aureus strain NAS_NP_181]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATGGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963

  coiA Staphylococcus aureus MW2

96.341

100

0.963