Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF777_RS06045 | Genome accession | NZ_CP062399 |
| Coordinates | 1239877..1240320 (+) | Length | 147 a.a. |
| NCBI ID | WP_001099009.1 | Uniprot ID | A0A0C6EXF8 |
| Organism | Staphylococcus aureus strain NAS_OP_143 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1234877..1245320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF777_RS06000 (IF777_05975) | - | 1235780..1236238 (-) | 459 | WP_000281660.1 | ImmA/IrrE family metallo-endopeptidase | - |
| IF777_RS06005 (IF777_05980) | - | 1236250..1236582 (-) | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| IF777_RS06010 (IF777_05985) | - | 1236775..1237005 (+) | 231 | WP_000243848.1 | helix-turn-helix transcriptional regulator | - |
| IF777_RS06015 (IF777_05990) | - | 1237029..1237742 (+) | 714 | WP_240053311.1 | BRO family protein | - |
| IF777_RS06020 (IF777_05995) | - | 1237844..1238005 (+) | 162 | WP_031925528.1 | DUF1270 domain-containing protein | - |
| IF777_RS06025 (IF777_06000) | - | 1238098..1238415 (+) | 318 | WP_000829610.1 | hypothetical protein | - |
| IF777_RS06030 (IF777_06005) | - | 1238420..1238680 (+) | 261 | WP_001556704.1 | DUF1108 family protein | - |
| IF777_RS06035 (IF777_06010) | - | 1238693..1239229 (+) | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| IF777_RS06040 (IF777_06015) | - | 1239230..1239880 (+) | 651 | WP_000840496.1 | ERF family protein | - |
| IF777_RS06045 (IF777_06020) | ssbA | 1239877..1240320 (+) | 444 | WP_001099009.1 | single-stranded DNA-binding protein | Machinery gene |
| IF777_RS06050 (IF777_06025) | - | 1240332..1241006 (+) | 675 | WP_031899480.1 | putative HNHc nuclease | - |
| IF777_RS06055 (IF777_06030) | - | 1241112..1241969 (-) | 858 | WP_000371250.1 | DUF4393 domain-containing protein | - |
| IF777_RS06060 (IF777_06035) | - | 1242034..1242804 (+) | 771 | WP_000190224.1 | conserved phage C-terminal domain-containing protein | - |
| IF777_RS06065 (IF777_06040) | - | 1242814..1243593 (+) | 780 | WP_031881362.1 | ATP-binding protein | - |
| IF777_RS06070 (IF777_06045) | - | 1243587..1243745 (+) | 159 | WP_000256594.1 | hypothetical protein | - |
| IF777_RS06075 (IF777_06050) | - | 1243758..1243979 (+) | 222 | WP_001123692.1 | DUF3269 family protein | - |
| IF777_RS06080 (IF777_06055) | - | 1243990..1244394 (+) | 405 | WP_031881361.1 | DUF1064 domain-containing protein | - |
| IF777_RS06085 (IF777_06060) | - | 1244399..1244584 (+) | 186 | WP_128415228.1 | DUF3113 family protein | - |
| IF777_RS06090 (IF777_06065) | - | 1244585..1244944 (+) | 360 | WP_031881360.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF777_RS06095 (IF777_06070) | - | 1244944..1245201 (+) | 258 | WP_031881359.1 | DUF3310 domain-containing protein | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 16321.89 Da Isoelectric Point: 5.8347
>NTDB_id=489188 IF777_RS06045 WP_001099009.1 1239877..1240320(+) (ssbA) [Staphylococcus aureus strain NAS_OP_143]
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
Nucleotide
Download Length: 444 bp
>NTDB_id=489188 IF777_RS06045 WP_001099009.1 1239877..1240320(+) (ssbA) [Staphylococcus aureus strain NAS_OP_143]
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTATTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTATTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
41.279 |
100 |
0.483 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
38.235 |
100 |
0.442 |