NTDB

Overview

Name	coiA	Type	Machinery gene
Locus tag	IF694_RS05410	Genome accession	NZ_CP062395
Coordinates	1087140..1088126 (-)	Length	328 a.a.
NCBI ID	WP_000959278.1	Uniprot ID	A0A6B5F529
Organism	Staphylococcus aureus strain NAS_AN_005
Function	require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1082140..1093126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IF694_RS05385 (IF694_05315)	-	1082399..1082746 (-)	348	WP_001242107.1	hypothetical protein	-
IF694_RS05390 (IF694_05320)	-	1082932..1083525 (+)	594	WP_000224616.1	CYTH domain-containing protein	-
IF694_RS05395 (IF694_05325)	-	1083629..1083994 (+)	366	WP_000214067.1	truncated hemoglobin YjbI	-
IF694_RS05400 (IF694_05330)	yjbH	1084017..1084823 (+)	807	WP_000896694.1	protease adaptor protein YjbH	-
IF694_RS05405 (IF694_05335)	pepF	1085284..1087092 (-)	1809	WP_000082725.1	oligoendopeptidase F	-
IF694_RS05410 (IF694_05340)	coiA	1087140..1088126 (-)	987	WP_000959278.1	competence protein CoiA family protein	Machinery gene
IF694_RS05415 (IF694_05345)	mecA	1088247..1088966 (-)	720	WP_001217727.1	adaptor protein MecA	-
IF694_RS05420 (IF694_05350)	spxA	1089347..1089742 (-)	396	WP_000258003.1	transcriptional regulator SpxA	-
IF694_RS05425 (IF694_05355)	trpS	1090037..1091026 (+)	990	WP_000448929.1	tryptophan--tRNA ligase	-
IF694_RS05430 (IF694_05360)	opp4C	1091068..1091949 (-)	882	WP_001180269.1	oligopeptide ABC transporter permease	-
IF694_RS05435 (IF694_05365)	opp4B	1091961..1092923 (-)	963	WP_000593417.1	oligopeptide ABC transporter permease	-

Sequence

Protein

Download Length: 328 a.a. Molecular weight: 38679.31 Da Isoelectric Point: 9.5882

                                >NTDB_id=489118 IF694_RS05410 WP_000959278.1 1087140..1088126(-) (coiA) [Staphylococcus aureus strain NAS_AN_005]

MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV

EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL

HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ

LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR

GNDVQILF

Nucleotide

Download Length: 987 bp

                                >NTDB_id=489118 IF694_RS05410 WP_000959278.1 1087140..1088126(-) (coiA) [Staphylococcus aureus strain NAS_AN_005]

ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT

GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT

GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA

GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA

TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA

ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT

CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA

AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG

CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG

TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG

GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA

AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA

GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A6B5F529

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
coiA	Staphylococcus aureus N315	96.646	100	0.966
coiA	Staphylococcus aureus MW2	96.646	100	0.966

Detailed information NTG0489118