Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   IF722_RS07760 Genome accession   NZ_CP062360
Coordinates   1613982..1614668 (-) Length   228 a.a.
NCBI ID   WP_098817867.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_157     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1608982..1619668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF722_RS07740 (IF722_07695) rpsT 1609896..1610147 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  IF722_RS07745 (IF722_07700) holA 1610192..1611166 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  IF722_RS07750 (IF722_07705) comEC 1611223..1613424 (-) 2202 WP_172440430.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  IF722_RS07755 (IF722_07710) - 1613429..1613890 (-) 462 WP_000439693.1 ComE operon protein 2 -
  IF722_RS07760 (IF722_07715) comEA 1613982..1614668 (-) 687 WP_098817867.1 ComEA family DNA-binding protein Machinery gene
  IF722_RS07765 (IF722_07720) - 1614708..1615424 (-) 717 WP_240025113.1 class I SAM-dependent methyltransferase -
  IF722_RS07770 (IF722_07725) rsfS 1615427..1615780 (-) 354 WP_001088020.1 ribosome silencing factor -
  IF722_RS07775 (IF722_07730) yqeK 1615781..1616365 (-) 585 WP_098817869.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  IF722_RS07780 (IF722_07735) nadD 1616355..1616924 (-) 570 WP_072491732.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  IF722_RS07785 (IF722_07740) yhbY 1616927..1617217 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  IF722_RS07790 (IF722_07745) aroE 1617221..1618027 (-) 807 WP_000666747.1 shikimate dehydrogenase -
  IF722_RS07795 (IF722_07750) yqeH 1618041..1619141 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25751.41 Da        Isoelectric Point: 9.6753

>NTDB_id=488454 IF722_RS07760 WP_098817867.1 1613982..1614668(-) (comEA) [Staphylococcus aureus strain NAS_AN_157]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVTGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=488454 IF722_RS07760 WP_098817867.1 1613982..1614668(-) (comEA) [Staphylococcus aureus strain NAS_AN_157]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCTAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCGAAATTAGAAGATGTTCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGAAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTACTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.797

99.561

0.974
  comEA Staphylococcus aureus N315

97.797

99.561

0.974