Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   IF726_RS05185 Genome accession   NZ_CP062358
Coordinates   1045605..1046591 (-) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain NAS_AN_184     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1040605..1051591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF726_RS05160 (IF726_05155) - 1040865..1041212 (-) 348 WP_001242103.1 hypothetical protein -
  IF726_RS05165 (IF726_05160) - 1041398..1041991 (+) 594 WP_000224619.1 CYTH domain-containing protein -
  IF726_RS05170 (IF726_05165) - 1042095..1042460 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  IF726_RS05175 (IF726_05170) yjbH 1042483..1043289 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  IF726_RS05180 (IF726_05175) pepF 1043749..1045557 (-) 1809 WP_240022014.1 oligoendopeptidase F -
  IF726_RS05185 (IF726_05180) coiA 1045605..1046591 (-) 987 WP_000959282.1 competence protein CoiA family protein Machinery gene
  IF726_RS05190 (IF726_05185) mecA 1046712..1047431 (-) 720 WP_240022015.1 adaptor protein MecA -
  IF726_RS05195 (IF726_05190) spxA 1047802..1048197 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  IF726_RS05200 (IF726_05195) trpS 1048490..1049479 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  IF726_RS05205 (IF726_05200) opp4C 1049521..1050402 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  IF726_RS05210 (IF726_05205) opp4B 1050414..1051376 (-) 963 WP_000915997.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=488409 IF726_RS05185 WP_000959282.1 1045605..1046591(-) (coiA) [Staphylococcus aureus strain NAS_AN_184]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=488409 IF726_RS05185 WP_000959282.1 1045605..1046591(-) (coiA) [Staphylococcus aureus strain NAS_AN_184]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1

  coiA Staphylococcus aureus MW2

97.561

100

0.976