Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   IF738_RS03140 Genome accession   NZ_CP062348
Coordinates   631441..632427 (+) Length   328 a.a.
NCBI ID   WP_000959293.1    Uniprot ID   A0A641A950
Organism   Staphylococcus aureus strain NAS_AN_260     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 626441..637427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF738_RS03115 (IF738_03110) opp4B 626654..627616 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  IF738_RS03120 (IF738_03115) opp4C 627628..628509 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  IF738_RS03125 (IF738_03120) trpS 628551..629540 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  IF738_RS03130 (IF738_03125) spxA 629835..630230 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  IF738_RS03135 (IF738_03130) mecA 630601..631320 (+) 720 WP_001217728.1 adaptor protein MecA -
  IF738_RS03140 (IF738_03135) coiA 631441..632427 (+) 987 WP_000959293.1 competence protein CoiA family protein Machinery gene
  IF738_RS03145 (IF738_03140) pepF 632475..634283 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  IF738_RS03150 (IF738_03145) yjbH 634743..635549 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  IF738_RS03155 (IF738_03150) - 635572..635937 (-) 366 WP_240024509.1 truncated hemoglobin -
  IF738_RS03160 (IF738_03155) - 636041..636634 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  IF738_RS03165 (IF738_03160) - 636820..637167 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38898.54 Da        Isoelectric Point: 9.7732

>NTDB_id=488183 IF738_RS03140 WP_000959293.1 631441..632427(+) (coiA) [Staphylococcus aureus strain NAS_AN_260]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVGLESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=488183 IF738_RS03140 WP_000959293.1 631441..632427(+) (coiA) [Staphylococcus aureus strain NAS_AN_260]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGGTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641A950

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

100

100

1
  coiA Staphylococcus aureus N315

97.561

100

0.976