Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | IF739_RS13345 | Genome accession | NZ_CP062346 |
| Coordinates | 2700727..2701122 (+) | Length | 131 a.a. |
| NCBI ID | WP_031927386.1 | Uniprot ID | A0A6B5T6J9 |
| Organism | Staphylococcus aureus strain NAS_AN_261 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2695727..2706122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF739_RS13315 (IF739_13180) | - | 2696929..2697333 (+) | 405 | WP_047213674.1 | F0F1 ATP synthase subunit epsilon | - |
| IF739_RS13320 (IF739_13185) | - | 2697744..2697821 (+) | 78 | Protein_2589 | hypothetical protein | - |
| IF739_RS13325 (IF739_13190) | - | 2697953..2698186 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| IF739_RS13330 (IF739_13195) | murA | 2698297..2699562 (+) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| IF739_RS13335 (IF739_13200) | fabZ | 2699596..2700036 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| IF739_RS13340 (IF739_13205) | - | 2700093..2700533 (-) | 441 | WP_047213672.1 | YwpF-like family protein | - |
| IF739_RS13345 (IF739_13210) | ssb | 2700727..2701122 (+) | 396 | WP_031927386.1 | single-stranded DNA-binding protein | Machinery gene |
| IF739_RS13350 (IF739_13215) | sceD | 2701511..2702206 (+) | 696 | WP_047213670.1 | lytic transglycosylase SceD | - |
| IF739_RS13355 (IF739_13220) | tenA | 2702593..2703282 (+) | 690 | WP_047213668.1 | thiaminase II | - |
| IF739_RS13360 (IF739_13225) | thiD | 2703275..2704105 (+) | 831 | WP_000594952.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| IF739_RS13365 (IF739_13230) | thiM | 2704089..2704880 (+) | 792 | WP_001108488.1 | hydroxyethylthiazole kinase | - |
| IF739_RS13370 (IF739_13235) | thiE | 2704882..2705523 (+) | 642 | WP_000483160.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15056.12 Da Isoelectric Point: 5.6824
>NTDB_id=488173 IF739_RS13345 WP_031927386.1 2700727..2701122(+) (ssb) [Staphylococcus aureus strain NAS_AN_261]
MLNKIIIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIIIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=488173 IF739_RS13345 WP_031927386.1 2700727..2701122(+) (ssb) [Staphylococcus aureus strain NAS_AN_261]
ATGCTAAATAAAATCATAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCATAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |
| ssb | Staphylococcus aureus MW2 |
98.473 |
100 |
0.985 |