Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   KEF49_RS07955 Genome accession   NZ_CP073635
Coordinates   1579186..1580454 (+) Length   422 a.a.
NCBI ID   WP_088612811.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain Ba13     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1574186..1585454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEF49_RS07930 (KEF49_07930) pyrH 1574981..1575703 (+) 723 WP_003154213.1 UMP kinase -
  KEF49_RS07935 (KEF49_07935) frr 1575706..1576263 (+) 558 WP_013352283.1 ribosome recycling factor -
  KEF49_RS07940 (KEF49_07940) - 1576389..1577171 (+) 783 WP_013352284.1 isoprenyl transferase -
  KEF49_RS07945 (KEF49_07945) - 1577175..1577972 (+) 798 WP_155759167.1 phosphatidate cytidylyltransferase -
  KEF49_RS07950 (KEF49_07950) dxr 1578028..1579179 (+) 1152 WP_212101378.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  KEF49_RS07955 (KEF49_07955) eeP 1579186..1580454 (+) 1269 WP_088612811.1 RIP metalloprotease RseP Regulator
  KEF49_RS07960 (KEF49_07960) - 1580487..1582181 (+) 1695 WP_212101380.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46562.35 Da        Isoelectric Point: 6.1728

>NTDB_id=487623 KEF49_RS07955 WP_088612811.1 1579186..1580454(+) (eeP) [Bacillus amyloliquefaciens strain Ba13]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIVEVETADLEHEMKITGYEQGKEDELSGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKDNPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGAFAAIAYGATSTVDVTKAILTNLSKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=487623 KEF49_RS07955 WP_088612811.1 1579186..1580454(+) (eeP) [Bacillus amyloliquefaciens strain Ba13]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTGGGGCATTTACTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGGTTCGGACCCAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGGCTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGATCCGGAAATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGACGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATACCC
CGACGCTTTAATTGTCGAGGTGGAGACGGCTGACCTTGAGCACGAAATGAAGATTACAGGGTATGAGCAGGGGAAAGAAG
ATGAACTGTCGGGCTTTACTGTCAGTCAGACCTCTTTTTTCATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAC
CGCCAATTCGGGTCAAAACCTGTATGGCAGCGGATTAAGGCGATTGCTGCCGGTCCGATTATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGAAAACTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGCGGTCATGGACTGACATC
GTGACAGCGGTAAAAGACAATCCCGGGAAAAAAATCGATGTCGCCGTGAAACGTGACGGCAAATCGTTTCATATCTCGGT
TACCCCTGAAGCCGTAAAAGATGAAAACAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGT
TTGCTGCGATCGCTTACGGCGCGACTTCTACGGTTGATGTCACAAAGGCGATCCTGACCAATCTGAGCAAAATCGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGCCCTGTCGGAATTTATGATATGACGGATCAGGTTGCAAAAACCGGCATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTTGGAATCGTCAACCTGCTGCCGATCCCGGCGCTTGACGGCG
GAAGACTGCTGTTTTTATTCATTGAAGCAATCCGCGGTAAGCCGATTAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTCGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

38.673

100

0.4
  eeP Streptococcus thermophilus LMG 18311

38.799

100

0.398