Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   STND_RS01145 Genome accession   NC_017563
Coordinates   200603..201865 (+) Length   420 a.a.
NCBI ID   WP_011680685.1    Uniprot ID   -
Organism   Streptococcus thermophilus ND03     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 195603..206865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STND_RS01120 (STND_0195) - 196184..197533 (+) 1350 WP_011680683.1 glucose-6-phosphate isomerase -
  STND_RS01125 (STND_0196) - 197721..198437 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  STND_RS01130 (STND_0197) - 198563..198901 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  STND_RS01135 (STND_0198) - 199030..199779 (+) 750 WP_002949314.1 isoprenyl transferase -
  STND_RS01140 (STND_0199) - 199792..200586 (+) 795 WP_014607913.1 phosphatidate cytidylyltransferase -
  STND_RS01145 (STND_0200) eeP 200603..201865 (+) 1263 WP_011680685.1 RIP metalloprotease RseP Regulator
  STND_RS01150 (STND_0201) - 201936..203798 (+) 1863 WP_024704167.1 proline--tRNA ligase -
  STND_RS01155 (STND_0202) - 204415..206355 (+) 1941 WP_014607915.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45621.05 Da        Isoelectric Point: 6.5104

>NTDB_id=48688 STND_RS01145 WP_011680685.1 200603..201865(+) (eeP) [Streptococcus thermophilus ND03]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=48688 STND_RS01145 WP_011680685.1 200603..201865(+) (eeP) [Streptococcus thermophilus ND03]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATCGGGATGGGTCCTAAAATTTTTGCACATACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(204-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

100

100

1

  eeP Streptococcus thermophilus LMG 18311

99.762

100

0.998


Multiple sequence alignment