Detailed information NTG0486625

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: IGX38_RS13630
• Genome accession: NZ_CP062162
• Coordinates: 2867885..2870110 (-)
• Length: 741 a.a.
• NCBI ID: WP_106443470.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain 2020WEIHUA_G
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2862885..2875110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGX38_RS13595 (IGX38_13555)	murB	2863275..2864294 (-)	1020	WP_106443466.1	UDP-N-acetylmuramate dehydrogenase	-
IGX38_RS13600 (IGX38_13560)	-	2864291..2864758 (-)	468	WP_106443467.1	low molecular weight protein-tyrosine-phosphatase	-
IGX38_RS13605 (IGX38_13565)	kdsB	2864760..2865524 (-)	765	WP_106443468.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IGX38_RS13610 (IGX38_13570)	-	2865521..2865706 (-)	186	WP_011913743.1	Trm112 family protein	-
IGX38_RS13615 (IGX38_13575)	lpxK	2865752..2866756 (-)	1005	WP_106443469.1	tetraacyldisaccharide 4'-kinase	-
IGX38_RS13620 (IGX38_13580)	-	2866756..2867184 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
IGX38_RS13625 (IGX38_13585)	-	2867181..2867813 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
IGX38_RS13630 (IGX38_13590)	comA	2867885..2870110 (-)	2226	WP_106443470.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IGX38_RS13635 (IGX38_13595)	-	2870255..2870770 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
IGX38_RS13640 (IGX38_13600)	-	2870783..2872027 (-)	1245	WP_106443585.1	lipoprotein-releasing ABC transporter permease subunit	-
IGX38_RS13645 (IGX38_13605)	lolD	2872027..2872725 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
IGX38_RS13650 (IGX38_13610)	-	2872733..2873980 (-)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
IGX38_RS13655 (IGX38_13615)	-	2874013..2874648 (+)	636	WP_242100102.1	PilZ domain-containing protein	-
IGX38_RS13660 (IGX38_13620)	-	2874652..2874960 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80989.51 Da
• Isoelectric Point: 9.9660

>NTDB_id=486625 IGX38_RS13630 WP_106443470.1 2867885..2870110(-) (comA) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPQLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LVFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLETLDIRAYDTALHGAIRI
ELGSFSPPQLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=486625 IGX38_RS13630 WP_106443470.1 2867885..2870110(-) (comA) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCAGCTACAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCAGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCAGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGACCCTTGACATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCAGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-673)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.087	96.356	0.646
comA	Ralstonia pseudosolanacearum GMI1000	36.761	100	0.386