Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | KBU60_RS05755 | Genome accession | NZ_CP073068 |
| Coordinates | 1238975..1239619 (+) | Length | 214 a.a. |
| NCBI ID | WP_005386783.1 | Uniprot ID | Q87NC3 |
| Organism | Vibrio parahaemolyticus strain FB-11 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1233975..1244619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KBU60_RS05735 (KBU60_05735) | - | 1234272..1234592 (-) | 321 | WP_029817335.1 | HI1450 family dsDNA-mimic protein | - |
| KBU60_RS05740 (KBU60_05740) | yeiP | 1234595..1235161 (-) | 567 | WP_005465079.1 | elongation factor P-like protein YeiP | - |
| KBU60_RS05745 (KBU60_05745) | - | 1235348..1236115 (+) | 768 | WP_021454126.1 | nucleotidyltransferase domain-containing protein | - |
| KBU60_RS05750 (KBU60_05750) | - | 1236112..1238475 (-) | 2364 | WP_020838764.1 | DNA polymerase II | - |
| KBU60_RS05755 (KBU60_05755) | letA | 1238975..1239619 (+) | 645 | WP_005386783.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| KBU60_RS05760 (KBU60_05760) | uvrC | 1239621..1241453 (+) | 1833 | WP_005494715.1 | excinuclease ABC subunit UvrC | Machinery gene |
| KBU60_RS05765 (KBU60_05765) | pgsA | 1241500..1242057 (+) | 558 | WP_005494716.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23765.32 Da Isoelectric Point: 5.6509
>NTDB_id=486499 KBU60_RS05755 WP_005386783.1 1238975..1239619(+) (letA) [Vibrio parahaemolyticus strain FB-11]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
Nucleotide
Download Length: 645 bp
>NTDB_id=486499 KBU60_RS05755 WP_005386783.1 1238975..1239619(+) (letA) [Vibrio parahaemolyticus strain FB-11]
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTTAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAATTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTTAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAATTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
50.952 |
98.131 |
0.5 |
| letA | Legionella pneumophila strain ERS1305867 |
50.952 |
98.131 |
0.5 |