Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   TL13_RS04780 Genome accession   NC_021213
Coordinates   959218..959886 (+) Length   222 a.a.
NCBI ID   WP_024381849.1    Uniprot ID   A0ABV2ERC1
Organism   Streptococcus suis TL13     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 954218..964886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TL13_RS04750 (TL13_0941) - 955329..955469 (+) 141 WP_015646829.1 hypothetical protein -
  TL13_RS04755 (TL13_0942) - 955482..955871 (+) 390 WP_015646830.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  TL13_RS04760 (TL13_0943) - 955880..956632 (+) 753 WP_015646831.1 ABC transporter ATP-binding protein -
  TL13_RS04765 (TL13_0944) - 956633..958603 (+) 1971 WP_015646832.1 ABC transporter permease -
  TL13_RS04770 (TL13_0945) relB 958694..958933 (+) 240 WP_015646833.1 type II toxin-antitoxin system RelB family antitoxin -
  TL13_RS04775 (TL13_0946) - 958974..959180 (+) 207 WP_413787540.1 type II toxin-antitoxin system RelE family toxin -
  TL13_RS04780 (TL13_0947) braR 959218..959886 (+) 669 WP_024381849.1 response regulator transcription factor Regulator
  TL13_RS04785 (TL13_0948) - 959883..960824 (+) 942 WP_015646835.1 sensor histidine kinase -
  TL13_RS04790 (TL13_0949) - 960901..962409 (+) 1509 WP_015646836.1 phosphomannomutase/phosphoglucomutase -
  TL13_RS04795 (TL13_0950) xerS 962479..963549 (-) 1071 WP_015646837.1 tyrosine recombinase XerS Machinery gene

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25564.39 Da        Isoelectric Point: 4.7792

>NTDB_id=48646 TL13_RS04780 WP_024381849.1 959218..959886(+) (braR) [Streptococcus suis TL13]
MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFI
SSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSNESEQVQLSPTETKIL
SALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 669 bp        

>NTDB_id=48646 TL13_RS04780 WP_024381849.1 959218..959886(+) (braR) [Streptococcus suis TL13]
ATGATGAAAAAAGAGAAGATTTATATTGTTGAAGACGATGAGATGATTGTCCAGCTCTTGAAGCAGCATTTGGGAAAATC
GTATCAGGTGGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCTGAAATCAAACCAGACTTGGTGCTGATGG
ACATTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATT
TCTTCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTGTCCAAGCCCTTTTCTCT
GGGAATTTTGGATGCCAAAATCGGTGCCTTTCTGCGTCGGGTCAATCAATTCAGCAAATCAACTGATTTGTCAATTGACC
AGTTCCAGCTTAGTTTGGACGGGCGATTTTCAAATGAATCGGAACAGGTTCAATTATCTCCTACGGAAACCAAGATTTTG
TCCGCCTTACTAGAACGACAAGGGCAGATTGTTAGCAAGGAAGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTAT
CGATCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACCG
TTCGTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.099

0.468

Multiple sequence alignment