Detailed information NTG0048585

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I872_RS10545
• Genome accession: NC_021175
• Coordinates: 2125678..2126793 (-)
• Length: 371 a.a.
• NCBI ID: WP_015606075.1
• Uniprot ID: A0ABN4B873
• Organism: Streptococcus cristatus AS 1.3089
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2120678..2131793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I872_RS10530 (I872_10580)	-	2121061..2122683 (-)	1623	WP_015606072.1	ATP-binding cassette domain-containing protein	-
I872_RS10535 (I872_10585)	trpS	2122921..2123946 (+)	1026	WP_015606073.1	tryptophan--tRNA ligase	-
I872_RS10540 (I872_10590)	guaB	2124112..2125593 (+)	1482	WP_015606074.1	IMP dehydrogenase	-
I872_RS10545 (I872_10595)	recF	2125678..2126793 (-)	1116	WP_015606075.1	DNA replication/repair protein RecF	Machinery gene
I872_RS10550 (I872_10605)	yaaA	2126797..2127185 (-)	389	Protein_2079	S4 domain-containing protein YaaA	-
I872_RS10555 (I872_10610)	yfmF	2127375..2128622 (+)	1248	WP_015606078.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I872_RS10560 (I872_10615)	yfmH	2128622..2129917 (+)	1296	WP_015606079.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I872_RS10565 (I872_10620)	rodZ	2129976..2130791 (+)	816	WP_015606080.1	cytoskeleton protein RodZ	-
I872_RS10570 (I872_10625)	pgsA	2130802..2131341 (+)	540	WP_015606081.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 42196.51 Da
• Isoelectric Point: 6.7255

>NTDB_id=48585 I872_RS10545 WP_015606075.1 2125678..2126793(-) (recF) [Streptococcus cristatus AS 1.3089]
MWLKTLKIKHFRNYQSAEVDFDPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRTDKDLIHFQEKNLQISGIIEKTAGK
IPLDIELTPKGRITKINHLKQGKLSDYIGVVNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLADLSGYNHVLKQR
NAYLKANDKIDETFLSVLDEQLIDFGCRVMQHRLDFIEKLEGFAQESHSDISQGKEKLTIKYVSSVPFSCLEDLEASFRA
ALSESCGRDLFKKNTGVGPHRDDINFFINDMEAGFGSQGQHRSVVLSLKLAEIKLIENLTKDTPILLLDDVMSELDNMRQ
LKLLETISQNIQTFITTTSLDHLHNLPEDINIFQISQGVIKKEENLSFTNK

Nucleotide

• Length: 1116 bp

>NTDB_id=48585 I872_RS10545 WP_015606075.1 2125678..2126793(-) (recF) [Streptococcus cristatus AS 1.3089]
ATGTGGTTAAAAACGCTGAAAATTAAACATTTTCGTAATTACCAGTCTGCAGAGGTTGATTTTGATCCTGGCCTTAATAT
CTTTCTGGGGCAAAATGCACAGGGGAAAACTAATATTCTAGAAGCCATCTATTTTTTAGCCCTTACTCGCAGTCACCGTA
CCCGAACCGATAAGGATTTGATTCATTTCCAAGAAAAAAATCTTCAAATTTCGGGAATTATTGAAAAAACAGCGGGTAAA
ATCCCACTTGACATCGAGTTGACACCAAAGGGGAGAATCACCAAAATAAATCATTTAAAACAAGGTAAATTATCAGATTA
TATAGGGGTTGTCAACGTTGTCTTGTTTGCTCCAGAAGATTTACAGCTCATTAAAGGTGCCCCTGCTTTACGCCGAAAAT
TTATTGATATTGAGCTTGGGCAAATCAAGCCCATCTACCTTGCTGACTTATCTGGCTATAATCATGTGCTCAAGCAAAGA
AATGCTTATCTTAAGGCCAATGACAAGATAGATGAAACCTTTCTTTCTGTTTTAGATGAGCAACTGATTGATTTTGGTTG
TCGTGTCATGCAACATCGCTTAGACTTTATTGAAAAGCTAGAGGGTTTTGCTCAGGAAAGTCATAGCGATATTTCTCAAG
GGAAAGAGAAATTGACAATCAAGTATGTATCCTCTGTTCCGTTTTCGTGTCTCGAAGACTTGGAAGCTTCTTTTCGAGCA
GCCTTATCAGAAAGCTGTGGACGCGATCTTTTCAAAAAAAATACAGGTGTCGGACCTCACCGAGATGATATCAACTTTTT
TATCAATGATATGGAAGCCGGATTTGGTAGCCAAGGCCAACATCGTAGCGTTGTCCTATCTCTCAAGTTAGCTGAAATTA
AACTCATCGAGAATCTTACAAAAGATACTCCAATATTATTGCTTGACGATGTAATGAGCGAGCTTGACAACATGCGTCAA
CTTAAATTATTAGAAACCATCTCTCAAAACATCCAGACTTTTATCACGACAACTAGCTTAGATCACTTACATAATCTACC
AGAAGATATTAATATTTTTCAGATAAGTCAAGGCGTCATTAAGAAAGAAGAGAACCTTAGCTTTACAAATAAGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.67	96.496	0.682
recF	Bacillus subtilis subsp. subtilis str. 168	44.054	99.73	0.439