Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   I872_RS08190 Genome accession   NC_021175
Coordinates   1658787..1659473 (-) Length   228 a.a.
NCBI ID   WP_015605639.1    Uniprot ID   A0ABN4B825
Organism   Streptococcus cristatus AS 1.3089     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1653787..1664473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS08170 (I872_08190) - 1654110..1656110 (-) 2001 WP_015605635.1 ABC transporter permease -
  I872_RS08175 (I872_08195) - 1656091..1656870 (-) 780 WP_015605636.1 ABC transporter ATP-binding protein -
  I872_RS08180 (I872_08200) - 1656953..1657711 (-) 759 WP_015605637.1 TraX family protein -
  I872_RS08185 (I872_08205) - 1657823..1658803 (-) 981 WP_015605638.1 sensor histidine kinase -
  I872_RS08190 (I872_08210) braR 1658787..1659473 (-) 687 WP_015605639.1 response regulator transcription factor Regulator
  I872_RS08195 (I872_08215) - 1659679..1660938 (+) 1260 WP_015605640.1 NRAMP family divalent metal transporter -
  I872_RS08200 (I872_08220) - 1661058..1662263 (+) 1206 WP_041826913.1 DUF2974 domain-containing protein -
  I872_RS08205 (I872_08225) - 1662508..1662903 (-) 396 WP_015605642.1 DUF805 domain-containing protein -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26310.51 Da        Isoelectric Point: 4.9774

>NTDB_id=48559 I872_RS08190 WP_015605639.1 1658787..1659473(-) (braR) [Streptococcus cristatus AS 1.3089]
MHKILLVEDDAVIRQMIKKMLEQWGYQVVAIEDFMQVLTTFVKEEPQLVLMDIGLPLFNGYHWCQEIRKISTVPIMFLSS
RDQSMDIVMAINMGADDYVTKPFDNNVFLAKVQGLLRRSYEFGTDQSLLEYQGVILNLKSMDLVYEGELVTLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEHGLKYFIETKKGIGYGLTNGHAG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=48559 I872_RS08190 WP_015605639.1 1658787..1659473(-) (braR) [Streptococcus cristatus AS 1.3089]
ATGCACAAGATTTTACTGGTCGAGGATGATGCGGTTATCCGTCAAATGATCAAAAAAATGCTGGAGCAGTGGGGCTATCA
GGTTGTGGCGATTGAGGATTTCATGCAGGTTTTGACGACCTTTGTCAAGGAGGAGCCCCAGCTGGTGCTGATGGATATTG
GTCTGCCCCTCTTTAACGGCTACCATTGGTGCCAGGAAATTCGGAAGATTTCGACGGTGCCAATTATGTTTCTATCTTCG
CGCGACCAGTCCATGGATATCGTCATGGCCATCAATATGGGCGCAGATGACTATGTGACCAAGCCTTTTGATAATAATGT
CTTTCTGGCAAAAGTTCAAGGCCTGCTGAGGCGATCGTATGAGTTTGGAACGGATCAAAGCCTTTTGGAATATCAGGGCG
TGATTTTAAATCTTAAGTCCATGGATTTGGTCTATGAGGGCGAGCTTGTAACGTTGACCAAGAATGAATTTCAGATCTTG
CGGGTGCTCTTTGAGCATTCCGGTAGTATCGTGGCGCGTGATGACTTGATGAAGGAGCTCTGGAACAGTGATTTCTTTAT
AGATGACAATACCTTGTCTGTCAATGTTGCCCGTTTGCGCAAGAAGCTGGAGGAGCACGGTCTGAAGTATTTCATTGAGA
CGAAAAAAGGGATAGGGTACGGTTTGACCAATGGACATGCAGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

95.614

0.461

  micA Streptococcus pneumoniae Cp1015

35.776

100

0.364


Multiple sequence alignment