Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IDM46_RS10370 Genome accession   NZ_CP061714
Coordinates   2206963..2207364 (-) Length   133 a.a.
NCBI ID   WP_182825315.1    Uniprot ID   A0A7X0QRE8
Organism   Luteimonas sp. MC1825     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2201963..2212364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IDM46_RS10355 (IDM46_10355) - 2203966..2205987 (-) 2022 WP_182825067.1 methyl-accepting chemotaxis protein -
  IDM46_RS10360 (IDM46_10360) - 2206019..2206546 (-) 528 WP_182825317.1 chemotaxis protein CheW -
  IDM46_RS10365 (IDM46_10365) - 2206578..2206943 (-) 366 WP_182825065.1 response regulator -
  IDM46_RS10370 (IDM46_10370) pilG 2206963..2207364 (-) 402 WP_182825315.1 twitching motility response regulator PilG Regulator
  IDM46_RS10375 (IDM46_10375) gshB 2207545..2208483 (+) 939 WP_185115635.1 glutathione synthase -
  IDM46_RS10380 (IDM46_10380) - 2208583..2209371 (+) 789 WP_185116077.1 energy transducer TonB -
  IDM46_RS10385 (IDM46_10385) tsaB 2209390..2210112 (-) 723 WP_185115636.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  IDM46_RS10390 (IDM46_10390) - 2210167..2212149 (-) 1983 WP_185115637.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14978.24 Da        Isoelectric Point: 8.0328

>NTDB_id=484344 IDM46_RS10370 WP_182825315.1 2206963..2207364(-) (pilG) [Luteimonas sp. MC1825]
MTQDENRAGSLDGLRVMVIDDSKTIRRTAETLLRREGADVVTATDGFEALAKIADQRPQIIFVDIMMPRLDGYQTCALIK
NNQLFKHTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRKHVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=484344 IDM46_RS10370 WP_182825315.1 2206963..2207364(-) (pilG) [Luteimonas sp. MC1825]
ATGACGCAGGACGAGAATCGCGCCGGCAGCCTTGATGGCCTGCGCGTGATGGTGATCGACGATTCGAAGACCATTCGCCG
CACGGCAGAAACCCTGCTGCGTCGCGAAGGCGCCGACGTTGTGACCGCGACCGACGGGTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCGGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCACTGATCAAG
AACAACCAGCTGTTCAAGCACACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCCGCGGCCGCAT
CGTGGGCTCCGAGCAGTACGTCACCAAGCCATTCACGCGCGAGGAACTCCTCGACGCCATCCGCAAGCACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7X0QRE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.774

93.233

0.669
  vicR Streptococcus mutans UA159

41.026

87.97

0.361