Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ID168_RS19185 Genome accession   NZ_CP061704
Coordinates   345477..345641 (+) Length   54 a.a.
NCBI ID   WP_301179044.1    Uniprot ID   -
Organism   Bacillus velezensis strain Y4_39     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 340477..350641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID168_RS19180 srfAB 342368..345460 (+) 3093 Protein_317 surfactin non-ribosomal peptide synthetase SrfAB -
  ID168_RS19185 comS 345477..345641 (+) 165 WP_301179044.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6155.15 Da        Isoelectric Point: 11.3346

>NTDB_id=484332 ID168_RS19185 WP_301179044.1 345477..345641(+) (comS) [Bacillus velezensis strain Y4_39]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCCKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=484332 ID168_RS19185 WP_301179044.1 345477..345641(+) (comS) [Bacillus velezensis strain Y4_39]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGCAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

56.522

85.185

0.481