Detailed information NTG0484324

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ID168_RS16510
• Genome accession: NZ_CP061704
• Coordinates: 3362906..3364069 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Y4_39
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3357906..3369069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID168_RS16480 (ID168_16480)	-	3358171..3358590 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
ID168_RS16485 (ID168_16485)	comFC	3358664..3359353 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
ID168_RS16490 (ID168_16490)	-	3359359..3359643 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
ID168_RS16495 (ID168_16495)	comFA	3359701..3361086 (-)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
ID168_RS16500 (ID168_16500)	-	3361194..3362042 (-)	849	WP_003151387.1	DegV family protein	-
ID168_RS16505 (ID168_16505)	degU	3362140..3362829 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ID168_RS16510 (ID168_16510)	degS	3362906..3364069 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ID168_RS16515 (ID168_16515)	-	3364292..3364939 (+)	648	WP_060657503.1	YigZ family protein	-
ID168_RS16520 (ID168_16520)	-	3364944..3366119 (+)	1176	WP_071392366.1	LCP family protein	-
ID168_RS16525 (ID168_16525)	-	3366209..3367285 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ID168_RS16530 (ID168_16530)	tuaH	3367418..3368614 (-)	1197	WP_094247452.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=484324 ID168_RS16510 WP_003151385.1 3362906..3364069(-) (degS) [Bacillus velezensis strain Y4_39]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=484324 ID168_RS16510 WP_003151385.1 3362906..3364069(-) (degS) [Bacillus velezensis strain Y4_39]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948