Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ID168_RS05580 Genome accession   NZ_CP061704
Coordinates   1080793..1080984 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain Y4_39     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1075793..1085984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID168_RS05550 (ID168_05550) argF 1076644..1077615 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  ID168_RS05555 (ID168_05555) - 1077691..1077870 (+) 180 WP_003155070.1 YjzC family protein -
  ID168_RS05560 (ID168_05560) - 1077907..1078092 (-) 186 WP_007409129.1 YjzD family protein -
  ID168_RS05565 (ID168_05565) - 1078353..1079087 (+) 735 WP_014417405.1 hypothetical protein -
  ID168_RS05570 (ID168_05570) - 1079170..1079736 (+) 567 WP_025649580.1 hypothetical protein -
  ID168_RS05575 (ID168_05575) med 1079827..1080780 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  ID168_RS05580 (ID168_05580) comZ 1080793..1080984 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ID168_RS05585 (ID168_05585) - 1081013..1081231 (-) 219 WP_007409123.1 hypothetical protein -
  ID168_RS05590 (ID168_05590) - 1081399..1082337 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ID168_RS05595 (ID168_05595) fabF 1082360..1083598 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  ID168_RS05600 (ID168_05600) - 1083682..1084467 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  ID168_RS05605 (ID168_05605) - 1084641..1085627 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=484278 ID168_RS05580 WP_003155061.1 1080793..1080984(+) (comZ) [Bacillus velezensis strain Y4_39]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=484278 ID168_RS05580 WP_003155061.1 1080793..1080984(+) (comZ) [Bacillus velezensis strain Y4_39]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794