Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ID168_RS05575 Genome accession   NZ_CP061704
Coordinates   1079827..1080780 (+) Length   317 a.a.
NCBI ID   WP_014417407.1    Uniprot ID   A0AAP4DIE0
Organism   Bacillus velezensis strain Y4_39     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1074827..1085780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID168_RS05550 (ID168_05550) argF 1076644..1077615 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  ID168_RS05555 (ID168_05555) - 1077691..1077870 (+) 180 WP_003155070.1 YjzC family protein -
  ID168_RS05560 (ID168_05560) - 1077907..1078092 (-) 186 WP_007409129.1 YjzD family protein -
  ID168_RS05565 (ID168_05565) - 1078353..1079087 (+) 735 WP_014417405.1 hypothetical protein -
  ID168_RS05570 (ID168_05570) - 1079170..1079736 (+) 567 WP_025649580.1 hypothetical protein -
  ID168_RS05575 (ID168_05575) med 1079827..1080780 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  ID168_RS05580 (ID168_05580) comZ 1080793..1080984 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ID168_RS05585 (ID168_05585) - 1081013..1081231 (-) 219 WP_007409123.1 hypothetical protein -
  ID168_RS05590 (ID168_05590) - 1081399..1082337 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ID168_RS05595 (ID168_05595) fabF 1082360..1083598 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  ID168_RS05600 (ID168_05600) - 1083682..1084467 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  ID168_RS05605 (ID168_05605) - 1084641..1085627 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35343.93 Da        Isoelectric Point: 4.6686

>NTDB_id=484277 ID168_RS05575 WP_014417407.1 1079827..1080780(+) (med) [Bacillus velezensis strain Y4_39]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=484277 ID168_RS05575 WP_014417407.1 1079827..1080780(+) (med) [Bacillus velezensis strain Y4_39]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGGACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.918

100

0.779