Detailed information NTG0483948

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: IC772_RS17925
• Genome accession: NZ_CP061664
• Coordinates: 3865866..3867020 (+)
• Length: 384 a.a.
• NCBI ID: WP_004705925.1
• Uniprot ID: N8R086
• Organism: Acinetobacter seifertii strain AS28
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3860866..3872020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC772_RS17900 (IC772_17890)	-	3861019..3862233 (+)	1215	WP_191016017.1	oxygenase MpaB family protein	-
IC772_RS17905 (IC772_17895)	-	3862302..3862508 (-)	207	WP_039252952.1	hypothetical protein	-
IC772_RS17910 (IC772_17900)	-	3862561..3864675 (-)	2115	WP_191016019.1	TonB-dependent copper receptor	-
IC772_RS17915 (IC772_17905)	-	3864749..3865177 (-)	429	WP_191016021.1	DUF2946 family protein	-
IC772_RS17920 (IC772_17910)	def	3865213..3865743 (-)	531	WP_004705924.1	peptide deformylase	-
IC772_RS17925 (IC772_17915)	tsaP	3865866..3867020 (+)	1155	WP_004705925.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
IC772_RS17930 (IC772_17920)	dprA	3867041..3868171 (+)	1131	WP_191016022.1	DNA-processing protein DprA	Machinery gene
IC772_RS17935 (IC772_17925)	-	3868222..3868791 (+)	570	WP_019458003.1	L-threonylcarbamoyladenylate synthase	-
IC772_RS17940 (IC772_17930)	-	3869182..3870102 (-)	921	WP_191016024.1	DMT family transporter	-
IC772_RS17945 (IC772_17935)	-	3870209..3870862 (-)	654	WP_191016026.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42338.20 Da
• Isoelectric Point: 7.8858

>NTDB_id=483948 IC772_RS17925 WP_004705925.1 3865866..3867020(+) (tsaP) [Acinetobacter seifertii strain AS28]
MKKVFDGMVQFHALGIKKHLLALALCTGVAFGTVAEVHAASPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
HSTILPADSIANTPYIVGTADQRVLAGKGQTIYARGQGLVEGQRYAVYREGEPYYFTDSKGKKHSLGIELSQVASGVAMS
TEKDITTLELTDSYDGEVRRGDRVMPEEQANLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTAQGVQVGQ
VFDIDQQGETIRDPKTKEPIQLPGQQIGSLMVFRTFDQLSYAYVLESNLPIKVGSSIQPPRFTD

Nucleotide

• Length: 1155 bp

>NTDB_id=483948 IC772_RS17925 WP_004705925.1 3865866..3867020(+) (tsaP) [Acinetobacter seifertii strain AS28]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTAGCACTCTGTAC
AGGAGTTGCATTTGGTACGGTAGCAGAGGTTCATGCTGCCAGTCCGAATCATAATCCGCCTTCTCTTAAAAGCAATGCAC
CCAATGTGTATGTTGTAAAACGTGGAGATACCTTATGGGATATTTCAGGTCATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCAAGCAATCAACATGTTAAAAATCCACACTGGATCTATCCTGGTGACAGATTACTACTATGCAGCTTAGA
TGGACGACCATTGGTAGGTAAAGATGAAGGAGATGGCTGTGTAGGTATTATTCGTCGTTACACAGGCCAAACCACAAACT
TGCAACCACAAGTTCGTGTCGAAGCATTAAATAACAGTGTACCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
CACAGTACTATTTTACCAGCCGATTCAATTGCCAACACACCTTACATTGTTGGGACAGCAGATCAACGTGTACTTGCAGG
AAAAGGCCAAACTATTTATGCAAGAGGACAAGGTCTAGTTGAAGGTCAGCGCTATGCTGTTTATCGCGAAGGCGAACCTT
ACTATTTCACAGACAGTAAAGGTAAAAAGCATAGCTTAGGCATAGAGCTGTCACAGGTTGCTTCTGGTGTTGCGATGTCT
ACTGAAAAAGACATTACCACATTAGAACTTACCGATAGCTATGATGGTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTAATTTACCAACATTATTTTACCCCGTAGATGCTAAACAAGTGACTGACGGTGGCAAAATTATTCGGGTCA
TGGGATCAATTGGTAGAGCTGCAAAAAATAGTGTCGTGACTTTAGACCGCGGTACAGCACAAGGTGTTCAGGTTGGTCAA
GTTTTTGATATTGATCAACAAGGCGAGACCATTCGCGATCCAAAAACAAAAGAACCAATTCAGCTCCCTGGTCAACAAAT
TGGTAGTTTAATGGTCTTTAGAACTTTTGATCAGCTGAGCTATGCTTATGTTCTAGAAAGCAACTTACCAATTAAAGTCG
GTTCAAGCATTCAGCCACCTCGTTTTACTGATTAG

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: N8R086

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	93.229	100	0.932