Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   J7W01_RS08845 Genome accession   NZ_CP072525
Coordinates   1701569..1702837 (+) Length   422 a.a.
NCBI ID   WP_072174245.1    Uniprot ID   -
Organism   Bacillus subtilis strain YB-04     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1696569..1707837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7W01_RS08820 (J7W01_08820) pyrH 1697342..1698064 (+) 723 WP_003220923.1 UMP kinase -
  J7W01_RS08825 (J7W01_08825) frr 1698066..1698623 (+) 558 WP_003231927.1 ribosome recycling factor -
  J7W01_RS08830 (J7W01_08830) uppS 1698754..1699536 (+) 783 WP_003231925.1 isoprenyl transferase -
  J7W01_RS08835 (J7W01_08835) cdsA 1699540..1700349 (+) 810 WP_072174243.1 phosphatidate cytidylyltransferase -
  J7W01_RS08840 (J7W01_08840) dxr 1700411..1701562 (+) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  J7W01_RS08845 (J7W01_08845) eeP 1701569..1702837 (+) 1269 WP_072174245.1 RIP metalloprotease RseP Regulator
  J7W01_RS08850 (J7W01_08850) proS 1702870..1704564 (+) 1695 WP_003231918.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46680.43 Da        Isoelectric Point: 5.0764

>NTDB_id=483820 J7W01_RS08845 WP_072174245.1 1701569..1702837(+) (eeP) [Bacillus subtilis strain YB-04]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRANKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDIGNQILETFGNLVT
GQFKINMLAGPVGIYDMTDQVAKTGLVNLVRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=483820 J7W01_RS08845 WP_072174245.1 1701569..1702837(+) (eeP) [Bacillus subtilis strain YB-04]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCAGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGCTAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGCCGCTTTGGTTCTTACGCGCCAACTGAGAAAGGCGTTC
TCTCAGCAGTTGCTTACGGCGCGACATCAACAGTTGACATTGGCAATCAAATCTTAGAAACGTTTGGTAATTTAGTAACA
GGACAATTTAAAATAAATATGTTGGCGGGACCAGTTGGTATTTATGATATGACAGACCAAGTGGCGAAAACCGGGTTAGT
TAATTTGGTTCGTTTCGCTGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.171

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.302

100

0.4