Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   J7S31_RS07295 Genome accession   NZ_CP072523
Coordinates   1414633..1415667 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain SHZ-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1409633..1420667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7S31_RS07260 (J7S31_07235) - 1410409..1410711 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  J7S31_RS07265 (J7S31_07240) - 1410704..1411000 (-) 297 WP_002983486.1 YlxR family protein -
  J7S31_RS07270 (J7S31_07245) nusA 1411016..1412173 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  J7S31_RS07275 (J7S31_07250) rimP 1412348..1412884 (-) 537 WP_011054929.1 ribosome maturation factor RimP -
  J7S31_RS07285 (J7S31_07260) trmB 1413143..1413778 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J7S31_RS07290 (J7S31_07265) - 1413778..1414569 (-) 792 WP_002983385.1 phosphotransferase family protein -
  J7S31_RS07295 (J7S31_07270) pptB 1414633..1415667 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  J7S31_RS07300 (J7S31_07275) pptA 1415670..1416395 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  J7S31_RS07305 (J7S31_07280) - 1416467..1416886 (+) 420 WP_002983376.1 HIT family protein -
  J7S31_RS07310 (J7S31_07285) - 1416883..1417239 (+) 357 WP_002988657.1 hypothetical protein -
  J7S31_RS07315 (J7S31_07290) - 1417350..1418633 (-) 1284 WP_002994335.1 LCP family protein -
  J7S31_RS07320 (J7S31_07295) - 1418642..1419166 (-) 525 WP_002983369.1 N-acetyltransferase -
  J7S31_RS07325 (J7S31_07300) tsaE 1419141..1419602 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=483727 J7S31_RS07295 WP_010922583.1 1414633..1415667(-) (pptB) [Streptococcus pyogenes strain SHZ-1]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=483727 J7S31_RS07295 WP_010922583.1 1414633..1415667(-) (pptB) [Streptococcus pyogenes strain SHZ-1]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427